Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g02826 ATGGCCGATAAGCAACCACACCACCGCCCTCAACGCCAAAGAAACTGCTGTTGCTGCCTCTTCGGAATCTTGTGGAAGATTCTGGTTGTACTCATCGTCCTCGCTGGCCTCGCAATCCTCATACTCTGGCTGGTAGTTCAACCCCGCTCCTTCAAGTTCCATGTCACGGAAGCCGACCTAACCCAATTCGAGTACAACACCAACAACAACACCCTCCACTACAACATGGTCCTCAACTTCACCGCACGCAACCCCAACAAAAAACTCAGCATCTACTACGACAAAGTAGAGGCATTAGCATTCTACGAGGATGTCAGGTTCTCGAATTACGATGTCCTAACGCACATGAACCCCTTCCGGCAGTACACGAAGAGCAGCAGTCCCATGAGCGCTGTTTTCTCAGGGCACCGAGTGCTGACACTAGACAATGAGCAAATCTCTGAGTTGAACCAAGACAAGAGTGACGGCGTTTACGACATCTATGTGAAGCTCAACTTCAGGATTAGATTCAGACTCGGGGATTACATATCCGGTAACTTCAAACCCAAGGTCAAATGTGACCTCAAGGTTCCCTTCGCTAACAATGCCACCCTAACTTTCTTTCAGACCACCAAGTGCGACGTCGATTACTAG 633 0.4945 MADKQPHHRPQRQRNCCCCLFGILWKILVVLIVLAGLAILILWLVVQPRSFKFHVTEADLTQFEYNTNNNTLHYNMVLNFTARNPNKKLSIYYDKVEALAFYEDVRFSNYDVLTHMNPFRQYTKSSSPMSAVFSGHRVLTLDNEQISELNQDKSDGVYDIYVKLNFRIRFRLGDYISGNFKPKVKCDLKVPFANNATLTFFQTTKCDVDY* 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g02826 210 PANTHER OS05G0367900 PROTEIN 13 192 IPR044839 GO:0098542
Phac1g02826 210 Pfam Late embryogenesis abundant protein 80 186 IPR004864 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g02826 Phac-Chr1 37292305 37293468 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac1g02826 45 193 SNARE and Associated Proteins AT1G32270 32.215 4.51e-19 82.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g02826 - - gmx:100807701 334.724
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac1g02826 1 37292305 37293468 Phac1g02826 1 37292305 37293468 ECH
Phac1g02826 1 37292305 37293468 Phac7g04171 7 41517208 41520420 PCT