Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g02779 ATGGAAATTATGCCACCAGGTTATCGTTTCTACCCTACAGAAGAGGAGCTGATTTCGTTCTATCTTCATAATAAACTCGAAGGAGAAAGAGATGACATGAATCGTGTTATCCCAGTGGTTGATATATACGATTACAACCCCTCCCAACTCCCACAAATCTCAGGAGAGGCGAGTCTGAGAGACACGGCGGAACAATGGTTTTTTTTCATTCCGAGGCAGGAGAGTGAAGCTCGAGGAGGAAGACCAAGACGTCTCACAACCACAGGGTACTGGAAAGCCACAGGGTCTCCAAATCATGTTTATTCTTCCGACAATCGCATCATAGGCATTAAAAGAACAATGGTTTTCTACTGTGGAAGAGCTCCAAACGGAGCCAAAACCGATTGGAAGATGAACGAGTATACGGCCATCAAAGATTCACAGTTAAGGAAGGAATTCAGTTTATGCAGAGTGTACAAAAAATCGAAGTGTTTGCGTGCGTTTGATAGAAGACCACCAGCGAGGAGGAACGCAGTGAGGTATTCCAGTGCTCAAAATGGTGAAGAGCAACAAAAGGGTTCGATCTCAACGTCTTTTGATGATCATAAGCATCAAATGTTAGAGAGAAGTGCAACATGTTCTCCAGAGAGTTCTTCCTCCGGAGACCTTGACCATGACCAACCCCCCCTGCACGGTGAGGGAGAAACCCAAATGGATGTCGACAACGACCCTTTTTTGGATTGGGAGAAAGTGGATTTGTTCTTGGGATCGGAACTATGA 759 0.4519 MEIMPPGYRFYPTEEELISFYLHNKLEGERDDMNRVIPVVDIYDYNPSQLPQISGEASLRDTAEQWFFFIPRQESEARGGRPRRLTTTGYWKATGSPNHVYSSDNRIIGIKRTMVFYCGRAPNGAKTDWKMNEYTAIKDSQLRKEFSLCRVYKKSKCLRAFDRRPPARRNAVRYSSAQNGEEQQKGSISTSFDDHKHQMLERSATCSPESSSSGDLDHDQPPLHGEGETQMDVDNDPFLDWEKVDLFLGSEL* 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g02779 252 Gene3D NAC domain 13 158 IPR036093 GO:0003677|GO:0006355
Phac1g02779 252 Pfam No apical meristem (NAM) protein 5 135 IPR003441 GO:0003677|GO:0006355
Phac1g02779 252 MobiDBLite consensus disorder prediction 219 237 - -
Phac1g02779 252 MobiDBLite consensus disorder prediction 188 202 - -
Phac1g02779 252 SUPERFAMILY NAC domain 4 154 IPR036093 GO:0003677|GO:0006355
Phac1g02779 252 ProSiteProfiles NAC domain profile. 4 154 IPR003441 GO:0003677|GO:0006355
Phac1g02779 252 MobiDBLite consensus disorder prediction 168 237 - -
Phac1g02779 252 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 3 203 - -
Phac1g02779 252 MobiDBLite consensus disorder prediction 172 187 - -
Phac1g02779 252 MobiDBLite consensus disorder prediction 203 217 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g02779 Phac-Chr1 36948903 36950942 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac1g02779 7 165 NAC Transcription Factor Family AT5G22380 62.275 7.13e-73 220
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Phac1g02779 NAM 6.8e-30 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g02779 - - pvu:PHAVU_001G192000g 498.434