Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g02730 ATGGCGGAAGAACACCGATGCCAAGCTCCCGAGGGTCACAGACTCTGCGCCAACAACTGCGGCTTCTTCGGTAGCCCCGCCACCATGAATCTCTGTTCCAAATGCTACAGAGACATCCGGCTCAAGGAAGAAGAACAAGCCAAAACCAAATCCACCATCGAAACCGCTCTGTCTTCATCCTCCGCCGCAGCAACACCAACAGCAACCGTCGCATCCACCGCTGTGGTTTCCTTGCCTGCGCCGGTTGAATCCCTCCCTCAACCGGCGGTGGTGACCGCGCCGGACGCGTCCGCACCGCTTCAGGCGAACCGGTGCGGCGCGTGTCGGAAGCGCGTGGGGTTGACCGGGTTCAAGTGCAGGTGTGGAACGACGTTCTGTGGGAGCCACAGGTACCCCGAGAAACACGCGTGTGGGTTCGATTTCAAGGCGGTGGGGAGAGAGGAGATAGCTCGGGCGAATCCGGTGATCAAAGGCGAGAAGCTACGGAGGATTTAA 495 0.598 MAEEHRCQAPEGHRLCANNCGFFGSPATMNLCSKCYRDIRLKEEEQAKTKSTIETALSSSSAAATPTATVASTAVVSLPAPVESLPQPAVVTAPDASAPLQANRCGACRKRVGLTGFKCRCGTTFCGSHRYPEKHACGFDFKAVGREEIARANPVIKGEKLRRI* 165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g02730 164 ProSiteProfiles Zinc finger AN1-type profile. 99 145 IPR000058 GO:0008270
Phac1g02730 164 ProSiteProfiles Zinc finger A20-type profile. 10 44 IPR002653 GO:0003677|GO:0008270
Phac1g02730 164 SMART AN1_Zf_4 105 142 IPR000058 GO:0008270
Phac1g02730 164 Gene3D - 1 67 - -
Phac1g02730 164 SUPERFAMILY AN1-like Zinc finger 97 159 IPR035896 -
Phac1g02730 164 FunFam Zinc finger AN1-type containing 6 81 160 - -
Phac1g02730 164 Pfam AN1-like Zinc finger 105 141 IPR000058 GO:0008270
Phac1g02730 164 Gene3D - 81 160 IPR035896 -
Phac1g02730 164 PANTHER AN1-TYPE ZINC FINGER PROTEIN 13 164 - -
Phac1g02730 164 SMART A20_3 13 37 IPR002653 GO:0003677|GO:0008270
Phac1g02730 164 Pfam A20-like zinc finger 14 37 IPR002653 GO:0003677|GO:0008270
Phac1g02730 164 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 15 60 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g02730 Phac-Chr1 36670348 36671496 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac1g02730 1 164 C2H2 Transcription Factor Family AT3G52800 53.529 2.17e-54 167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g02730 - - gmx:100527251 280.411
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac1g02730 1 36670348 36671496 Phac1g02730 1 36670348 36671496 ECH
Phac1g02730 1 36670348 36671496 Phac7g03649 7 38091699 38099980 PCT