Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g02714 ATGGACTTGCATCTGAAGCAATGGAGAAACCAGCATGAGTCAGAGGAACAACATTCTACAAAGATGCCAAAACTTCTCCCTGAATCCCATCAACAGCCACAAACACAATCATCTGCCTCTGCACTCCCTTTGTTTGTACCTGAACCCAACAGCAAAGTCAGCACCCTGTCAGATTCAACATTAGCAGCTACTAACAGACTTCCCAGGATGGGGAGCTACTTCAGCTTGTCTCAGTGGCAGGAACTTGAGTTGCAGGCTTTGATATTCAGGTACATGTTAGCTGGTGCTGCTGTTCCTCCTGAACTCCTTCAACCAATCAAGAAAAGTCTTCTTCATTCCCCTCACTATTTCCTCCATCACCCTCTCCAACATTACCAACCTGCTTTGCTGCAATCAGGGTACTGGGGCAGAGGAGCGATGGATCCAGAACCAGGGCGGTGCCGGAGAACTGACGGCAAAAAGTGGCGGTGCTCTAGGGACGTGGTGGCTGGGCAAAAGTACTGTGAGCGCCACATGCATCGTGGTAGAAACCGTTCAAGAAAGCCTGTGGAACTACCCACACCAAGTAGTGCTAATTGTGGTGGTAGTGGTGGTGGTGCTGGATCTCAAGGACTAGGTGCTTCATCTTCCATTTCTTCACCGCCGCTAGCTACTGCTTCTCTCAAATCCCCTTTTGATCTTCTTCATCTTAGTGAACGCTCCTCTGGGACCAAGAATGAAGACAAGAGCTTGTTTGAAAACGAAGATCATGTGGGTGGGGATGGCAGAACAGGTGGGCATATGCTGAGACATTTTTTCGATGATTGGCCAAGATCACTGGAAGACTCTGACAACGTTGAAAACAATGCTGGCCGGATGAACTCGGCCACATGCCTCTCTATTTCTATGCCCGGAAATGCTTCCTCCTCCTCGGATGTATCATTGAAATTGTCCACGGGCTATGGAGAGGACCCGGGCCCAAGAAATGAGAATTTGAATCTCGAGGCAGAGCAACTGCAGTTGAATTGGGCCGGAGGATGGGCCTCGGGTAGTCAAGTGGCTTCAATGGGTGGGCCACTTGCTGAGGCACTCAGATCATCTACTTCAACTTCATCTCCTACTAGCGTTTTGCATCACTTGCCTCCTGGTTCTGGATCTGAGACCAGCTTCATTAGCACCTGA 1161 0.4961 MDLHLKQWRNQHESEEQHSTKMPKLLPESHQQPQTQSSASALPLFVPEPNSKVSTLSDSTLAATNRLPRMGSYFSLSQWQELELQALIFRYMLAGAAVPPELLQPIKKSLLHSPHYFLHHPLQHYQPALLQSGYWGRGAMDPEPGRCRRTDGKKWRCSRDVVAGQKYCERHMHRGRNRSRKPVELPTPSSANCGGSGGGAGSQGLGASSSISSPPLATASLKSPFDLLHLSERSSGTKNEDKSLFENEDHVGGDGRTGGHMLRHFFDDWPRSLEDSDNVENNAGRMNSATCLSISMPGNASSSSDVSLKLSTGYGEDPGPRNENLNLEAEQLQLNWAGGWASGSQVASMGGPLAEALRSSTSTSSPTSVLHHLPPGSGSETSFIST* 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g02714 386 PANTHER GROWTH-REGULATING FACTOR 5 32 302 IPR031137 GO:0005634|GO:0006351|GO:0032502
Phac1g02714 386 MobiDBLite consensus disorder prediction 170 211 - -
Phac1g02714 386 MobiDBLite consensus disorder prediction 233 256 - -
Phac1g02714 386 MobiDBLite consensus disorder prediction 355 386 - -
Phac1g02714 386 ProSiteProfiles WRC domain profile. 141 185 IPR014977 -
Phac1g02714 386 SMART QLQ_2 72 108 IPR014978 GO:0005524|GO:0005634|GO:0006355
Phac1g02714 386 MobiDBLite consensus disorder prediction 345 386 - -
Phac1g02714 386 MobiDBLite consensus disorder prediction 183 211 - -
Phac1g02714 386 MobiDBLite consensus disorder prediction 1 38 - -
Phac1g02714 386 ProSiteProfiles QLQ domain profile. 73 108 IPR014978 GO:0005524|GO:0005634|GO:0006355
Phac1g02714 386 Pfam WRC 142 184 IPR014977 -
Phac1g02714 386 MobiDBLite consensus disorder prediction 232 256 - -
Phac1g02714 386 MobiDBLite consensus disorder prediction 1 23 - -
Phac1g02714 386 MobiDBLite consensus disorder prediction 24 38 - -
Phac1g02714 386 Pfam QLQ 74 106 IPR014978 GO:0005524|GO:0005634|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g02714 Phac-Chr1 36501455 36505004 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac1g02714 1 373 GRF Transcription Factor Family AT3G52910 51.289 5.21e-96 290
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRF Phac1g02714 WRC 2.4e-22 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g02714 - - gmx:100814842 602.053