Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g02706 ATGGAAATGGAGGACCATCATCATCATCACCATCATCATCAACATCATGAGCAGCAGCAACAGCAGCAACAACAGCAGTATGCCATCACTGATCTCAGGCAACTCATGAACGGCCAGAGGTCCACCCATTTCCCCTCCATGCCGCCGCAGCCCAAGGCGGAGCTCTTCCCCGGCGGCCACCCCAACCTGGCCGCCACGCAGCACTTCGAGATGATGATGTTTGGTCGTCAAGTGGCGGACATAATGCCTCGGTGTCTTCATGACTTTGCCTCTACCGATTCCGCCACGAATAATAACAATACGAACATCGCTGCTGCGACTCCCACGACCACCACTAGCGCCTCCACTCCTCCGCTTAGTTGCTTAGAGGGTGAGACCGCAGGATGCATCGGTGGAGACGCCTCTACTGGAAGATGGCCCAGACAAGAGACTCTCACTCTTCTTGAGATCAGATCTCGCCTCGACTCTAAATTCAAAGAGGCTAATCAAAAGGGTCCCCTATGGGATGAAGTTTCTAGGATCATGTCTGAAGAACATGGATATCAAAGGAGCGGGAAGAAGTGCCGGGAGAAGTTTGAAAACCTGTACAAATATTACAAGAAGACAAAGGAGGGAAAAGCAGGAAGACAGGATGGGAAACATTACAGGTTCTTTCGTCAACTTGAAGCCTTATATGGGGAAAACAGTAATCAAACTTCGGTGCCAGAAACCAATTTTGGTAGCAGCAGCCTTCGTTTCAACGCAAACAGCCACAACCCTTCTCAAACAAATCAAGAAATGTTTCACTCCCAGAAGCATTGTGATAGCCTAAGTCTCACCAACTCCACTGATTTGGACACGTCATCATCGGATGACAATGATCAGAATAGCACTGGAGGACTCAAGGACAATGACTCCACGGAGAAGAGGAGAAAGAGGCTGAGCGGTAGAAGCTGGAAGGTGAAGATAAAAGACTTTATTGACTCACAGATGAGGAAGCTGGTGGAGAAGCAAGAGGAGTGGTTGGATAAACTCACAAAGACACTGGAACAGAAAGAAAAGGAGAGGGTGTTCAGAGAAGAAGAATGGAGGAGACAAGAAGCTGTGAGGTTGGAGAGGGAACACAAATTTTGGGCTAAAGAGAGGGCATGGATTGAAGCCAGGGATGCTGCTTTAATGGAGGCCTTGCAAAAACTAACAGGAAATGAGATGATAAAGAGTACTCAATCTCCTGAGGGTCGTATGGTAACTGGAATTCAAAACCATAGTGAAAACCTGAATGAAGATGGGAGTGAAATACTAAATAGTACTACTGTCAGAGGTGCTGAAAGCTGGCCAGAATCTGAGATTACTAGGCTTCAACAACTGAGAGCTGAGATGGAGACAAGGTATATGCAAAGTGGGTGTTCAGAAGAGATTATGTGGGAGGAAATAGCAACCAAAATGGCTTGTTTTGGTTACGAAAGGAGTGCTTTAGTGTTCAAAGAGAAATGGGAAAGTAGCAGCAACTATGCAAGGAATGCTAAAGATGGAAACAAGAAGCGCAAGGAAGACACTAGAGGTTGTTTCTACTTCGATAACAGCGAACAGTCTTCTCTGTATAACCAAGGAGGGGCCTATTGTGATATTAATGATCAAAGGCACGAGAGGAGGCTGCAAAATGATGGCTCTTCGCCTTCGAATTCAAATGTTGGAAATGCTGTTGCTGGTGATAACTGCTTTCCCTTCTTGATGACTGAGAGTGCAAATTTGTGGGAGAACTATAGCTTAAAGGTTAATAAAGCAAGCCAAAACCAGTGA 1779 0.4626 MEMEDHHHHHHHHQHHEQQQQQQQQQYAITDLRQLMNGQRSTHFPSMPPQPKAELFPGGHPNLAATQHFEMMMFGRQVADIMPRCLHDFASTDSATNNNNTNIAAATPTTTTSASTPPLSCLEGETAGCIGGDASTGRWPRQETLTLLEIRSRLDSKFKEANQKGPLWDEVSRIMSEEHGYQRSGKKCREKFENLYKYYKKTKEGKAGRQDGKHYRFFRQLEALYGENSNQTSVPETNFGSSSLRFNANSHNPSQTNQEMFHSQKHCDSLSLTNSTDLDTSSSDDNDQNSTGGLKDNDSTEKRRKRLSGRSWKVKIKDFIDSQMRKLVEKQEEWLDKLTKTLEQKEKERVFREEEWRRQEAVRLEREHKFWAKERAWIEARDAALMEALQKLTGNEMIKSTQSPEGRMVTGIQNHSENLNEDGSEILNSTTVRGAESWPESEITRLQQLRAEMETRYMQSGCSEEIMWEEIATKMACFGYERSALVFKEKWESSSNYARNAKDGNKKRKEDTRGCFYFDNSEQSSLYNQGGAYCDINDQRHERRLQNDGSSPSNSNVGNAVAGDNCFPFLMTESANLWENYSLKVNKASQNQ* 593
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g02706 592 MobiDBLite consensus disorder prediction 228 307 - -
Phac1g02706 592 Pfam Myb/SANT-like DNA-binding domain 437 520 IPR044822 -
Phac1g02706 592 Pfam Myb/SANT-like DNA-binding domain 138 224 IPR044822 -
Phac1g02706 592 ProSiteProfiles Myb-like domain profile. 131 196 IPR001005 -
Phac1g02706 592 MobiDBLite consensus disorder prediction 228 295 - -
Phac1g02706 592 CDD GT1 138 203 - -
Phac1g02706 592 Gene3D - 139 201 - -
Phac1g02706 592 Gene3D - 438 500 - -
Phac1g02706 592 PANTHER FI21293P1 68 551 - -
Phac1g02706 592 CDD GT1 438 502 - -
Phac1g02706 592 MobiDBLite consensus disorder prediction 1 25 - -
Phac1g02706 592 FunFam Trihelix transcription factor GT-2 438 500 - -
Phac1g02706 592 FunFam trihelix transcription factor PTL-like 139 201 - -
Phac1g02706 592 Coils Coil 328 355 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g02706 Phac-Chr1 36370362 36374136 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac1g02706 21 587 Trihelix Transcription Factor Family AT5G03680 46.154 5.75e-146 432
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Phac1g02706 Myb_DNA-bind_4 3.1e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g02706 - - gmx:100813245 956.051