Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Phac1g02701 | ATGAATATGGAGAGCACGCGCAGATCGCTGGATAGATCGAGAGAGCCGGGTCCCAAGAAGCCTCGATTGATCGAGGAACTCAGTGCCCGACAGTTACCTCAACGACAGCAAGGGTCTGGGGCAGTTGCTTCGGGGGTGTCTGCGAGGGTTAGGGTAAATGACAGGGACTCCGAAAGCAGCGATTCGGGTCGCGGCGGTGGGTACCACCCGCAGTCTCCCCCTCACAATGAGCTTGTGGCTCAGTATAGGACCGCGCTTGCTGAGCTTACTTTCAATTCGAAGCCGATAATCACGAACTTGACTATTATTGCCGGGGAGAACCAGTCTGCTGCCAAGGCAATTGCCGCCACTGTTTGTGCTAACATTATAGAGGTTCCAAGTGATCAAAAACTGCCATCTCTTTATCTCTTAGACAGTATTGTTAAGAACATCGGGCGGGATTATATAAAATATTTTGCTGTCAGACTACCTGAGGTATTCTGTAAGGCTTACAGACAGGTTGATCCTATTGTCCATTCAAGTATGAAACATCTTTTTGGAACTTGGAAAGGAGTCTTTCCTCCTCAGTGCCTTCAGATGATTGAGAAGGAACTTGGCTTTACACCTGCAGTCAATGGTTCAGCTTCGGTATCTGCTACAGTCAGGAGTGATTTGCAGTCACAACGCCCACCTCATAGTATCCATGTGAATCCCAAGTATTTAGAAAGGCAGCGTCTCCAACAGTCAAGTACGAGTAAAGGAGTTGTTGATGACATGACTGGAGCTTTGTTAAACTCAAATGAGGAGTCAGAGAGGCCAGAGAGAGCTTTGGGTGCTTCTCGACCATGGCTGGATCCTAGGATTAACATGCTTAATAATCAGCACGCACACAGAGATGCATTTAATGATTCTGTTCCTGAGAAGAGCATTGATGGATCATTTGGAGGCAGTCAATATGGTTCTGGCATTTCTAGTAATTTGGTCTCAGGGGCTGGAAGAACTGGAACTAAGCTCATTGATTTAGGGCACGAAAAACCATGGTTCAAAACAGATGGCGGTGATGCAGAGACCATATCTGGGCAAAAAAATGGTTTCAGTCTCAAGCGTAGTTTTTCAAATCGTGAAGCACCAAAGTCCATAAATTTGGAAGCACATCGTCAGCCAAGACAAAGTATAAATAACATACGGAACAATGTGATGTCAGGTAACTGGAAAAATTCTGAAGAGGAGGAGTTCACGTGGGATGAGATGAACACTGGTTTGACTGATCATGGACCCAATGTGTCCAGCAATTTGAGCACAGATTCATGGATGACAGATGATGAAAATTTGGAAGGTGAAGATCACCTGCATATTCTACGCCCTTATGGGGCAAAGGTTGATAGGGAAATATCCACTGTTAAGAAACAACTGCCTGGTTTTGGTGGCCATCCACCTTCATCATGGCAATTGCAGAAGCACCACACAATTGATAAGTTGAATCTGAAGCCAGGTTACTCAGATGGATTTGTGTCCACTATTAGTGGCTTACCAGCCAACGCAAATTCTTTACCTGTCAAGAAGGGGAACCAATCTTTTACGTCAAAGGCAGTAGTAGGAATGGCCAAAATTGTAGGGCAGCAATTTGATGGGGAGATTGAATCCCCTTCTGGGCAATCACCTTTGCAACGACAGTCTCCATCACTGCCAGGAACAGCATACCACCCTCATTCAATGCAAAATTTGCCCGAGCAAGAAATGCCCCAGAATATAAGAACATCTCAATTTTTGGGAGGTCCAACAAGTCAGCACATTAGAGATCGCTCACCTACCCTTCATCCCATTGTTCAGGTTGGTAACATGCGAAGAACACAGGAAAAGGACATGCAGGGCCCATTATCTTCTGCAACTATTCAACCAAAGCTTCAGCAACAGCAGCTCGACATTTCTCAGACTGAAGTTTCTGCTAAAACTAAGCTGCCCCAGTCTAAAACTTCTTTAACCAAAGAAGTTTCAGAACAGTCAACCAAAAATAATTTGTCATCTGCAGCTGTGAAGAGTGGAATCATCCCCAAGAAATCAATTACCAGTAATCTGGATCCAAGGAAGCATCTATCCAAGTCCGGGGTTCAGCTTCCTCAGTCTGGTAGGTCTTCTCCTACCACAATAATTTCTTCAGGGTCTGCAGTGGCATCACCATCTTTATTAGATCCTCTGCATAAAGATTCGTCTTCAGTGCCAAAAAAACCTCAAAGAAAGGCTGGACAACCACCACAGAAGCTTTCTACTCAACCACTTGCTTCTTCTAATTTGAATGCTGCCAAAAATAATGTAAATCCTATCGCAAACCTTTTAAGCTCATTGGTTGCAAAGGGTTTGATATCTGCAGAAACAGAATCACCGACTATGGTACCAAGCGAAGTGCTGAAGGGATCCAAAGATAAAGCTGCAAACATTAGCACCAGTAGCTCAATCCCAGTTACATCAGTTTCTGATTCTGCAGCTGTCCCAGTATCATCTGCCAGAGATGAGGTTGACGCCGCAGCAAAATCCTCTCTTCACTCGGCTCAATCTACTAGCACAAAAATCAGAAATCTCATTGGCTTTGATTTTAAACCTAATGTTATTCGAGAATTCCATGAACCGGTGATTAGGGAATTATTGGATGATCTCCCTCATCATTGCAAAATTTGCGGTATTAGGTTTAAACAAGAAGAACAGTATCAGAGACACTTGGAGTGGCATGCCACAAGAGAACATGGTCCAATTAAAGTATCCAGAAGTTGGTATCCTAAGTCAGGTGATTGGATTGCTGGCAAGGTAGAAGAATATTCATCTGAGTTTGAGTTTGCTGACTCGGTTGTTGTAGACAACCAAGAAACAGACAGCAGTCAATTGGATATGATGATTCGAGCAGATGAAAATCAGTGTTTGTGTGTATTGTGTGGCGAGCTATTTGAAGATGTGTACTGTCAAGAAAGGAACGAGTGGATGTTCAAAGGGGCCGTGTATATGAACTACTCGGATATCAATAGTGAGATGGAAAGTAGAAATGCGGGTCCCATCATTCATGCCAAATGCTTATCCGAGAACTCAATTGTCACCAATTTGGATAGTGATTAA | 3081 | 0.4398 | MNMESTRRSLDRSREPGPKKPRLIEELSARQLPQRQQGSGAVASGVSARVRVNDRDSESSDSGRGGGYHPQSPPHNELVAQYRTALAELTFNSKPIITNLTIIAGENQSAAKAIAATVCANIIEVPSDQKLPSLYLLDSIVKNIGRDYIKYFAVRLPEVFCKAYRQVDPIVHSSMKHLFGTWKGVFPPQCLQMIEKELGFTPAVNGSASVSATVRSDLQSQRPPHSIHVNPKYLERQRLQQSSTSKGVVDDMTGALLNSNEESERPERALGASRPWLDPRINMLNNQHAHRDAFNDSVPEKSIDGSFGGSQYGSGISSNLVSGAGRTGTKLIDLGHEKPWFKTDGGDAETISGQKNGFSLKRSFSNREAPKSINLEAHRQPRQSINNIRNNVMSGNWKNSEEEEFTWDEMNTGLTDHGPNVSSNLSTDSWMTDDENLEGEDHLHILRPYGAKVDREISTVKKQLPGFGGHPPSSWQLQKHHTIDKLNLKPGYSDGFVSTISGLPANANSLPVKKGNQSFTSKAVVGMAKIVGQQFDGEIESPSGQSPLQRQSPSLPGTAYHPHSMQNLPEQEMPQNIRTSQFLGGPTSQHIRDRSPTLHPIVQVGNMRRTQEKDMQGPLSSATIQPKLQQQQLDISQTEVSAKTKLPQSKTSLTKEVSEQSTKNNLSSAAVKSGIIPKKSITSNLDPRKHLSKSGVQLPQSGRSSPTTIISSGSAVASPSLLDPLHKDSSSVPKKPQRKAGQPPQKLSTQPLASSNLNAAKNNVNPIANLLSSLVAKGLISAETESPTMVPSEVLKGSKDKAANISTSSSIPVTSVSDSAAVPVSSARDEVDAAAKSSLHSAQSTSTKIRNLIGFDFKPNVIREFHEPVIRELLDDLPHHCKICGIRFKQEEQYQRHLEWHATREHGPIKVSRSWYPKSGDWIAGKVEEYSSEFEFADSVVVDNQETDSSQLDMMIRADENQCLCVLCGELFEDVYCQERNEWMFKGAVYMNYSDINSEMESRNAGPIIHAKCLSENSIVTNLDSD* | 1027 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Phac1g02701 | 1026 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 881 | 901 | IPR013087 | - | |
Phac1g02701 | 1026 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 879 | 906 | IPR013087 | - | |
Phac1g02701 | 1026 | MobiDBLite | consensus disorder prediction | 537 | 566 | - | - | |
Phac1g02701 | 1026 | MobiDBLite | consensus disorder prediction | 639 | 751 | - | - | |
Phac1g02701 | 1026 | SUPERFAMILY | ENTH/VHS domain | 74 | 202 | IPR008942 | - | |
Phac1g02701 | 1026 | MobiDBLite | consensus disorder prediction | 538 | 566 | - | - | |
Phac1g02701 | 1026 | Gene3D | - | 70 | 199 | IPR008942 | - | |
Phac1g02701 | 1026 | CDD | CID_Pcf11 | 79 | 189 | IPR047415 | - | |
Phac1g02701 | 1026 | ProSiteProfiles | CID domain profile. | 74 | 202 | IPR006569 | - | |
Phac1g02701 | 1026 | MobiDBLite | consensus disorder prediction | 1 | 26 | - | - | |
Phac1g02701 | 1026 | MobiDBLite | consensus disorder prediction | 214 | 251 | - | - | |
Phac1g02701 | 1026 | PANTHER | PRE-MRNA CLEAVAGE COMPLEX II | 37 | 1017 | IPR045154 | GO:0000993|GO:0003729|GO:0006369|GO:0006378|GO:0006379 | |
Phac1g02701 | 1026 | MobiDBLite | consensus disorder prediction | 687 | 718 | - | - | |
Phac1g02701 | 1026 | SMART | 558neu5 | 77 | 199 | IPR006569 | - | |
Phac1g02701 | 1026 | MobiDBLite | consensus disorder prediction | 1 | 75 | - | - | |
Phac1g02701 | 1026 | MobiDBLite | consensus disorder prediction | 579 | 594 | - | - | |
Phac1g02701 | 1026 | MobiDBLite | consensus disorder prediction | 639 | 671 | - | - | |
Phac1g02701 | 1026 | MobiDBLite | consensus disorder prediction | 235 | 249 | - | - | |
Phac1g02701 | 1026 | FunFam | polyadenylation and cleavage factor homolog 4 | 71 | 199 | - | - | |
Phac1g02701 | 1026 | Pfam | CID domain | 84 | 192 | IPR006569 | - | |
Phac1g02701 | 1026 | MobiDBLite | consensus disorder prediction | 579 | 599 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Phac1g02701 | Phac-Chr1 | 36318858 | 36325261 | Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Phac1g02701 | 31 | 414 | C2H2 Transcription Factor Family | AT4G04885 | 36.410 | 3.57e-54 | 201 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | C2H2 | Phac1g02701 | CID | 3.5e-12 | CL0020 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Phac1g02701 | K14400 | - | gmx:100788958 | 1603.57 |