Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g02694 ATGGAGTTTTGGGGTGTTGAAGTGAAAAGTGGACAATCTCTCAAGGTCGATCCAGGAGATGACAAGATTATCCACCTTTCAAATGCATGCCTGGGGGATGTGACTAAGGCTAAAGGAGGTGAACTGGTAGCCCTGAACGTGAAGTTTGGTAACCAGAAGCTTGTGCTTGGAACTCTTTCTTCTGATAAATTTCCTCAAATATCTTATGATTTAATATTTGAGAAGGAATTTGAGCTATCGCATAGCTGGAAAAATGGAAGTGTCTTCTTTACCGGATTCAAAGCTCAATCTCAGTCAGAGTCTGATAATGATGAAGATTCTGACGATTTTGATGAAGATATTCCAGTTAGTGCTGCCAATGGGAAACCTGAGTTTAAGGTGAAGAATGGTGTAAAACTTGATGAGGCTAAACAGAAGAAGATAGCAGATCCAAGGAAGAATGAAAAGGCTAAGGAAAAGGATACAAATGGCGAAGATGAAGATTCATCCGAATCTGATGATGATGATGATTCAAGTGAAGATAAGCCCACAGCAAATGGTGACATAGAAAGTAGTGAAGGTGATGAGGATAGTGATGATGATGATGAGGAGGAGGATGAGGATGAGGATGGTGATGACGATGAATCTGATGAGGAGACACCCAAGAAGATTGAAGAAGGCAATAAGCGGAAGATTGACTCTTCTAAGAAAACACCTGTCCCTGCGAAAAAGGCAAAATTTGTTACTCCTCAGAAGACTGATAGCAAGAATGTTGTCCATATAGCTACTCCTCACCCTTCTAAGCAGGCTGGTAAATCAACTGCAAATAACAAGCGGCAGACTCCGAAGTCAGGGGGAGATTACAGCTGCAAGCCTTGCAGCAGGTCATTTAAGACAGAAGATGCCTTAAACTCTCATAATAGGGCCAAGCACAGTGCTAAGTAA 924 0.4177 MEFWGVEVKSGQSLKVDPGDDKIIHLSNACLGDVTKAKGGELVALNVKFGNQKLVLGTLSSDKFPQISYDLIFEKEFELSHSWKNGSVFFTGFKAQSQSESDNDEDSDDFDEDIPVSAANGKPEFKVKNGVKLDEAKQKKIADPRKNEKAKEKDTNGEDEDSSESDDDDDSSEDKPTANGDIESSEGDEDSDDDDEEEDEDEDGDDDESDEETPKKIEEGNKRKIDSSKKTPVPAKKAKFVTPQKTDSKNVVHIATPHPSKQAGKSTANNKRQTPKSGGDYSCKPCSRSFKTEDALNSHNRAKHSAK* 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g02694 307 Gene3D Nucleoplasmin core domain 1 100 - -
Phac1g02694 307 MobiDBLite consensus disorder prediction 214 233 - -
Phac1g02694 307 MobiDBLite consensus disorder prediction 98 307 - -
Phac1g02694 307 Pfam C2H2-type zinc finger 281 305 - -
Phac1g02694 307 ProSitePatterns Zinc finger C2H2 type domain signature. 283 304 IPR013087 -
Phac1g02694 307 MobiDBLite consensus disorder prediction 183 213 - -
Phac1g02694 307 FunFam Histone deacetylase HDT1 1 99 - -
Phac1g02694 307 MobiDBLite consensus disorder prediction 127 158 - -
Phac1g02694 307 ProSiteProfiles Zinc finger C2H2 type domain profile. 281 307 IPR013087 -
Phac1g02694 307 MobiDBLite consensus disorder prediction 159 174 - -
Phac1g02694 307 Pfam Nucleoplasmin-like domain 3 93 IPR041232 -
Phac1g02694 307 MobiDBLite consensus disorder prediction 244 277 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g02694 Phac-Chr1 36222335 36233564 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac1g02694 1 306 C2H2 Transcription Factor Family AT5G03740 39.937 1.08e-59 191
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Phac1g02694 NPL 2.5e-10 CL0055
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g02694 - - ccaj:109796568 430.639