Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Phac1g02693 | ATGCTGTACGGATTCTTTTACAACCCCGGTCTCAAAATAAACCTTGACGATGTGGTGAAACTTAACATACTGATCCATCTAGGTCGCCCAATCATTGTTGATTTTTCTCCTGTTACGGATTTTCGAGAAGCTACTTGTAGACAGTATGAGGAGAATGTATGCAATCGAGGTGGCTACTGCAACTTCATGCACCTAAAGAAGATTAGCAGGGATTTGAGAAGGAAATTATTTGGAAGAAATAGGCGGTGGAATGGCCGCAGTGGAAGCCGGAGCAGGAGCCCCCCAAGGAGTCGTAACCATGGGGAACATTCACATTCTGTCCGTAATCCTGGTAGAAGAGATTTTGAAAGGCCCCCCCATGGCCACCATGGTAGGAGGCCTAGAAGCCGTAGTCCTCGACACAGAGGAGGAAAACGAAGTAGAAGTCCAGTGGGAGGGAGGGATAGAAGTCCGGTCAGAGAAAGCAGTGCAGAAAGGAGAGCTAAGATAGAACAATGGAACAGGGAGAAGGAACAAGATGACACTGGTAACAAGAACAATACGAAAAGCAATGAGTATCAAGAACGGAGTGGTGCACAAAATGGCAGTGAATCTGGTAACCATCAGATATAG | 612 | 0.4641 | MLYGFFYNPGLKINLDDVVKLNILIHLGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRDLRRKLFGRNRRWNGRSGSRSRSPPRSRNHGEHSHSVRNPGRRDFERPPHGHHGRRPRSRSPRHRGGKRSRSPVGGRDRSPVRESSAERRAKIEQWNREKEQDDTGNKNNTKSNEYQERSGAQNGSESGNHQI* | 204 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Phac1g02693 | 203 | ProSiteProfiles | Zinc finger C3H1-type profile. | 40 | 67 | IPR000571 | GO:0046872 | |
Phac1g02693 | 203 | MobiDBLite | consensus disorder prediction | 95 | 121 | - | - | |
Phac1g02693 | 203 | PRINTS | U2 auxiliary factor small subunit signature | 22 | 46 | IPR009145 | GO:0000398|GO:0003723|GO:0089701 | |
Phac1g02693 | 203 | PRINTS | U2 auxiliary factor small subunit signature | 57 | 69 | IPR009145 | GO:0000398|GO:0003723|GO:0089701 | |
Phac1g02693 | 203 | PANTHER | U2 SNRNP AUXILIARY FACTOR, SMALL SUBUNIT | 21 | 177 | IPR009145 | GO:0000398|GO:0003723|GO:0089701 | |
Phac1g02693 | 203 | Pfam | Zinc finger C-x8-C-x5-C-x3-H type (and similar) | 42 | 65 | IPR000571 | GO:0046872 | |
Phac1g02693 | 203 | MobiDBLite | consensus disorder prediction | 179 | 203 | - | - | |
Phac1g02693 | 203 | MobiDBLite | consensus disorder prediction | 80 | 203 | - | - | |
Phac1g02693 | 203 | MobiDBLite | consensus disorder prediction | 122 | 140 | - | - | |
Phac1g02693 | 203 | MobiDBLite | consensus disorder prediction | 141 | 178 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Phac1g02693 | Phac-Chr1 | 36217771 | 36221028 | Dispersed/Tandem |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | C3H | Phac1g02693 | zf-CCCH | 0.00018 | CL0537 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Phac1g02693 | K12836 | - | gmx:100783847 | 242.276 |