Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g02693 ATGCTGTACGGATTCTTTTACAACCCCGGTCTCAAAATAAACCTTGACGATGTGGTGAAACTTAACATACTGATCCATCTAGGTCGCCCAATCATTGTTGATTTTTCTCCTGTTACGGATTTTCGAGAAGCTACTTGTAGACAGTATGAGGAGAATGTATGCAATCGAGGTGGCTACTGCAACTTCATGCACCTAAAGAAGATTAGCAGGGATTTGAGAAGGAAATTATTTGGAAGAAATAGGCGGTGGAATGGCCGCAGTGGAAGCCGGAGCAGGAGCCCCCCAAGGAGTCGTAACCATGGGGAACATTCACATTCTGTCCGTAATCCTGGTAGAAGAGATTTTGAAAGGCCCCCCCATGGCCACCATGGTAGGAGGCCTAGAAGCCGTAGTCCTCGACACAGAGGAGGAAAACGAAGTAGAAGTCCAGTGGGAGGGAGGGATAGAAGTCCGGTCAGAGAAAGCAGTGCAGAAAGGAGAGCTAAGATAGAACAATGGAACAGGGAGAAGGAACAAGATGACACTGGTAACAAGAACAATACGAAAAGCAATGAGTATCAAGAACGGAGTGGTGCACAAAATGGCAGTGAATCTGGTAACCATCAGATATAG 612 0.4641 MLYGFFYNPGLKINLDDVVKLNILIHLGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRDLRRKLFGRNRRWNGRSGSRSRSPPRSRNHGEHSHSVRNPGRRDFERPPHGHHGRRPRSRSPRHRGGKRSRSPVGGRDRSPVRESSAERRAKIEQWNREKEQDDTGNKNNTKSNEYQERSGAQNGSESGNHQI* 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g02693 203 ProSiteProfiles Zinc finger C3H1-type profile. 40 67 IPR000571 GO:0046872
Phac1g02693 203 MobiDBLite consensus disorder prediction 95 121 - -
Phac1g02693 203 PRINTS U2 auxiliary factor small subunit signature 22 46 IPR009145 GO:0000398|GO:0003723|GO:0089701
Phac1g02693 203 PRINTS U2 auxiliary factor small subunit signature 57 69 IPR009145 GO:0000398|GO:0003723|GO:0089701
Phac1g02693 203 PANTHER U2 SNRNP AUXILIARY FACTOR, SMALL SUBUNIT 21 177 IPR009145 GO:0000398|GO:0003723|GO:0089701
Phac1g02693 203 Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) 42 65 IPR000571 GO:0046872
Phac1g02693 203 MobiDBLite consensus disorder prediction 179 203 - -
Phac1g02693 203 MobiDBLite consensus disorder prediction 80 203 - -
Phac1g02693 203 MobiDBLite consensus disorder prediction 122 140 - -
Phac1g02693 203 MobiDBLite consensus disorder prediction 141 178 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g02693 Phac-Chr1 36217771 36221028 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Phac1g02693 zf-CCCH 0.00018 CL0537
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g02693 K12836 - gmx:100783847 242.276