Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g02678 ATGAAACACCCTTCTTCCATAAACCTGTCACTGGCATTGGCCTTCACCATCCTCTATGTTGCAGATGCTGCATGGCAAAATGATACACTCGCACTAACCCAATTCCGCCTCCAAACCGACACCCACGGCAACCTTCTCTCCAACTGGACCGGAGCGGACGCCTGTTCCGCCGCGTGGCTCGGAGTGGAGTGCTCCCCAAATGGCAGAGTGGTGGGCCTCTCCCTCCCTTCCCTTAACCTCCGTGGCCCAATTGATTCTCTTTCCCCACTTCTCTACCTCCGCTTCCTCGACCTCCACGAAAACCGCTTAAACGGTACCGTTTCCCCTCTCTTAAACTGCACTGCCCTCGAACTTCTCTACCTTTCCCACAATGACTTCTCCGGCGATATTCCGCCGCAGATATCTTCCCTCCGCCTCCTCCTCCGCCTTGACATCTCCGACAACAACATCCGCGGTCCAATCCCCAACCAAGTCGCCAAATTAACCCACCTCCTCACTCTTCGGTTACAGAACAACGCCCTTTCCGGCCACGTTCCCGACCTCTCCGCTTCCCTTCTCAACCTCACCCAACTCAACGTAACCAACAATGAACTTCGTGGCCACGTTCCCGATTCCATGCTCGCAAAATTCGGCAACGCCAGCTTTTCCGGAAATCACGCTCTATGTGGATCCACCCCGTTGCCCAAATGTTCTGAAACCGAACCAGATACGGAGACCACAATAACCGTTCCTTCAAAACCGAGCTCGTTCCCTCAAACAAGTAGTGTCACTCTCTCTGACACTCCGAAGAAGAAAGGACTGAGGGCGGGTGTCATAGTGGCGATTGTGGTGGCGGTGCTGGTGACGGTGCTGGTGGCGATGTCATTCGCGGTGGCGCACTGCTGCGCGAGGGGAGGGGAAGGCTATGGGTCGGCGGTGGGGAGCGAGAGTGGGAAGAGGAAGAGTGGGAGTAGTTCTGGGAGTGAGAAGAAGGTGTATGGAAATGGTGGGAACTTCGATAGAGATAGCGATGGGACGAACACTGAGACGGAACGAAGCAAGCTGGTGTTTTTCGATAGGAGGAACCAGTTTGAGTTGGAGGATCTGCTTCGAGCATCGGCGGAGATGCTGGGAAAAGGATGCTTGGGAACGGTTTACAGAGCGGTGCTCGACGATGGGTGCACCGTGGCAGTGAAGAGACTCAAAGACGCAAACCCCTGCGAGAGAAACGAGTTTGAACAGTACATGGACGTTGTAGGGAAGCTGAAACACCCCAACATTGTTAAACTCCGAGCTTATTACTATGCCAAGGAAGAAAAGCTTCTTGTGTATGATTACCTCCCCAATGGAAGCTTGCATGCTCTTCTTCATGGTAACCGTGGACCTGGAAGGATTCCATTGGATTGGACAACGAGAATAAGCTTGGTGTTAGGTGCGGCTAGAGGGTTGGCCAGGATTCATGCAGAGTACAACGCGTCCAAGATACCTCACGGGAACGTCAAATCCTCCAACGTGCTTCTCGACAAAAACGGAGTCGCTTTGATCTCCGACTTCGGGTTATCGCTGCTGTTGAACCCTGTTCACGCGATTGCTCGGTTGGGAGGGTACAGAGCGCCGGAACAGGTTGAAGTGAAGAGGCTGTCGCAGGAGGCTGACGTGTACGCTTTCGGGGTGTTGGTGCTGGAGGTGTTGACAGGGAGGTCACCGTCGACACCGTACCCTGGTTCCGCAGCTCGTCCGCGCGTGGAGGATGAGAGTGAGGTGGATCTTCCGAAGTGGGTTGGGTCTGTGGTGAAGGAGGAGTGGACCGCTGAGGTGTTCGACGAGGAGCTGTTGCGGTACAAGAACATCGAGGAGGAGTTGGTAGCGATGTTGCACGTGGGAGTGGCGTGCGTGGCGGCGCAACCGGAGAAGAGGCCGAGTATGTTGGAGGTTGTGAAGATGGTTGAGGATCTGAGGGTGGAACAGTCTCCTCTGGGAGAGGATTATGATGAGGCACGGTCACGCAATTCGCTTTCGCCGTCGCTTCCCACCACCGAAGATGGCCTTGCTTAA 2034 0.5482 MKHPSSINLSLALAFTILYVADAAWQNDTLALTQFRLQTDTHGNLLSNWTGADACSAAWLGVECSPNGRVVGLSLPSLNLRGPIDSLSPLLYLRFLDLHENRLNGTVSPLLNCTALELLYLSHNDFSGDIPPQISSLRLLLRLDISDNNIRGPIPNQVAKLTHLLTLRLQNNALSGHVPDLSASLLNLTQLNVTNNELRGHVPDSMLAKFGNASFSGNHALCGSTPLPKCSETEPDTETTITVPSKPSSFPQTSSVTLSDTPKKKGLRAGVIVAIVVAVLVTVLVAMSFAVAHCCARGGEGYGSAVGSESGKRKSGSSSGSEKKVYGNGGNFDRDSDGTNTETERSKLVFFDRRNQFELEDLLRASAEMLGKGCLGTVYRAVLDDGCTVAVKRLKDANPCERNEFEQYMDVVGKLKHPNIVKLRAYYYAKEEKLLVYDYLPNGSLHALLHGNRGPGRIPLDWTTRISLVLGAARGLARIHAEYNASKIPHGNVKSSNVLLDKNGVALISDFGLSLLLNPVHAIARLGGYRAPEQVEVKRLSQEADVYAFGVLVLEVLTGRSPSTPYPGSAARPRVEDESEVDLPKWVGSVVKEEWTAEVFDEELLRYKNIEEELVAMLHVGVACVAAQPEKRPSMLEVVKMVEDLRVEQSPLGEDYDEARSRNSLSPSLPTTEDGLA* 678
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g02678 677 MobiDBLite consensus disorder prediction 302 340 - -
Phac1g02678 677 Gene3D Transferase(Phosphotransferase) domain 1 440 663 - -
Phac1g02678 677 SUPERFAMILY Protein kinase-like (PK-like) 368 642 IPR011009 -
Phac1g02678 677 CDD STKc_IRAK 370 645 - -
Phac1g02678 677 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 11 647 IPR046959 -
Phac1g02678 677 MobiDBLite consensus disorder prediction 231 262 - -
Phac1g02678 677 ProSiteProfiles Protein kinase domain profile. 364 645 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac1g02678 677 MobiDBLite consensus disorder prediction 650 677 - -
Phac1g02678 677 Gene3D Phosphorylase Kinase; domain 1 334 439 - -
Phac1g02678 677 SUPERFAMILY L domain-like 26 206 - -
Phac1g02678 677 MobiDBLite consensus disorder prediction 310 325 - -
Phac1g02678 677 MobiDBLite consensus disorder prediction 231 261 - -
Phac1g02678 677 FunFam Nuclear pore complex protein NUP107 25 180 - -
Phac1g02678 677 Pfam Leucine rich repeat N-terminal domain 27 65 IPR013210 -
Phac1g02678 677 Pfam Protein kinase domain 368 640 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac1g02678 677 Gene3D Ribonuclease Inhibitor 27 140 IPR032675 -
Phac1g02678 677 Gene3D Ribonuclease Inhibitor 141 219 IPR032675 -
Phac1g02678 677 FunFam pollen receptor-like kinase 1 334 439 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g02678 Phac-Chr1 36119972 36122803 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac1g02678 26 673 Receptor kinase-like Gene Family AT2G36570 65.667 0.0 838
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Phac1g02678 Pkinase 3.1e-33 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g02678 - - gmx:100808402 1114.37