Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g02673 ATGGATTTCAATGGAAGAGATCTTCAAACAAATATGGATTGGCATTGCACCACAAAACCATTTGTTCCTCAGCCAGAGACCTTAAGCTTCTTCTACAACTATAACAACCACCCATATCCAGGAGTGGAAGTGAAACAAGCGACATTGTTGGAGACAGGAGAAAGGTCGAATCCGGCAATGGAAAACGGTAGCAAAGAGAAGAAGAAGCGGTTAACAAGCAAGCAGATAGAGTTATTGGAGAGGAGCTTCCAGGAGGAAATAAAGTTAGACCCTGAAAGGAAGATGAAGCTTTCGAGGGAGCTGTGCCTCCAGCCACGCCAAATCGCTGTTTGGTTCCAAAATAGACGTACAAGGTGGAAAACGAAGCAGCTTGAGCACTTGTACGATGTTCTCAAACACCAATATGATGTCATCTCCAACGAAAAGCAGAAGCTTCAAGAAGAGGTTATGAAGTTGAAGGCAATGCTAAGTAAAGAGCAAGGTTTTGGGACGCAAAGATTGGGAGGTTATCCAGAAATATCTGGAGAAGAAACGGTAGAAAGCACGTCAGAGGGTCTAAGGGGTTCTAATAACAAGGCATGGGGAAAGAGTAACATTGAGCAGGTTGCAGATGAGGGCCTTTGTTCTTTGAGTGTGGAGGATTATAACACTGTTTCACTGCCTCTCTGCCACTGGCCTATTGTGCCTTATTAG 693 0.443 MDFNGRDLQTNMDWHCTTKPFVPQPETLSFFYNYNNHPYPGVEVKQATLLETGERSNPAMENGSKEKKKRLTSKQIELLERSFQEEIKLDPERKMKLSRELCLQPRQIAVWFQNRRTRWKTKQLEHLYDVLKHQYDVISNEKQKLQEEVMKLKAMLSKEQGFGTQRLGGYPEISGEETVESTSEGLRGSNNKAWGKSNIEQVADEGLCSLSVEDYNTVSLPLCHWPIVPY* 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g02673 230 Gene3D - 59 129 - -
Phac1g02673 230 FunFam Putative homeobox-leucine zipper protein ATHB-51 64 127 - -
Phac1g02673 230 Pfam Homeodomain 65 120 IPR001356 GO:0003677
Phac1g02673 230 SUPERFAMILY Homeodomain-like 57 124 IPR009057 -
Phac1g02673 230 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN 61 176 IPR045224 GO:0003700
Phac1g02673 230 ProSiteProfiles 'Homeobox' domain profile. 62 122 IPR001356 GO:0003677
Phac1g02673 230 Coils Coil 128 155 - -
Phac1g02673 230 ProSitePatterns 'Homeobox' domain signature. 97 120 IPR017970 GO:0000981|GO:0006355
Phac1g02673 230 Pfam Homeobox associated leucine zipper 122 156 IPR003106 GO:0006355|GO:0043565
Phac1g02673 230 CDD homeodomain 65 123 IPR001356 GO:0003677
Phac1g02673 230 SMART HOX_1 64 126 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g02673 Phac-Chr1 36081146 36083174 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac1g02673 53 156 Homeobox Transcription Factor Family AT2G36610 59.821 1.34e-39 133
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Phac1g02673 Homeodomain 2.7e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g02673 - - vra:106757543 386.726
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac1g02673 1 36081146 36083174 Phac1g02673 1 36081146 36083174 ECH