Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g02672 ATGGATTTCAATGGAAGAGATCTTCAAACAAATATGGATTGGCATTGCACCACAAAACCATTTGTTCCTCAGCCAGAGACCTTAAGCTTCTTCTACAACTATAACAACCACCCATATCCAGGAGTGGAAGTGAAACAAGCGACATTGTTGGAGACAGGAGAAAGGTCGAATCCGGCAATGGAAAACGGTAGCAAAGAGAAGAAGAAGCGGTTAACAAGCAAGCAGATAGAGTTATTGGAGAGGAGCTTCCAGGAGGAAATAAAGTTAGACCCTGAAAGGAAGATGAAGCTTTCGAGGGAGCTGTGCCTCCAGCCACGCCAAATCGCTGTTTGGTTCCAAAATAGACGTACAAGGTGGAAAACGAAGCAGCTTGAGCACTTGTACGATGTTCTCAAACACCAATATGATGTCATCTCCAACGAAAAGCAGAAGCTTCAAGAAGAGGTACCTTCGCACTTCACTTCACACACGCATTCCAAATGTTTGGTTTCTTGCTTTCACACATATCCTTGTCTGTCTCCATCAACCTCTAAACCATATATTATACATTCAAACATCTTTTCTTTTCAAGGTTAA 576 0.4236 MDFNGRDLQTNMDWHCTTKPFVPQPETLSFFYNYNNHPYPGVEVKQATLLETGERSNPAMENGSKEKKKRLTSKQIELLERSFQEEIKLDPERKMKLSRELCLQPRQIAVWFQNRRTRWKTKQLEHLYDVLKHQYDVISNEKQKLQEEVPSHFTSHTHSKCLVSCFHTYPCLSPSTSKPYIIHSNIFSFQG* 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g02672 191 Gene3D - 59 130 - -
Phac1g02672 191 SUPERFAMILY Homeodomain-like 56 124 IPR009057 -
Phac1g02672 191 ProSiteProfiles 'Homeobox' domain profile. 62 122 IPR001356 GO:0003677
Phac1g02672 191 FunFam Putative homeobox-leucine zipper protein ATHB-51 64 127 - -
Phac1g02672 191 Coils Coil 128 148 - -
Phac1g02672 191 ProSitePatterns 'Homeobox' domain signature. 97 120 IPR017970 GO:0000981|GO:0006355
Phac1g02672 191 CDD homeodomain 65 123 IPR001356 GO:0003677
Phac1g02672 191 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN 61 149 IPR045224 GO:0003700
Phac1g02672 191 Pfam Homeodomain 65 120 IPR001356 GO:0003677
Phac1g02672 191 SMART HOX_1 64 126 IPR001356 GO:0003677
Phac1g02672 191 Pfam Homeobox associated leucine zipper 122 149 IPR003106 GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g02672 Phac-Chr1 36081146 36083174 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac1g02672 23 167 Homeobox Transcription Factor Family AT5G03790 49.367 6.65e-40 132
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Phac1g02672 Homeodomain 1.9e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g02672 - - vra:106757543 257.299