Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g02671 ATGGTCCTCAAAACTGAACTATGCAGATTCAGTGGTGCCAAGATTTACCCAGGAAAAGGCATCAGATTTGTTCGTGGTGATTCTCAGGTTTTCCTATTTGCCAATTCCAAATGCAAGAGGTATTTCCACAACCGCTTGAAGCCATCAAAGCTTACCTGGACTGCAATGTACAGGAAGCAACACAAGAAGGACATTGCGCAAGAAGCTGTGAAGAAGAGAAGACGCGCTGCCAAGAAGCCTTACTCTAGGTCCATTGTCGGTGCCACTCTGGAAGTTATCCAGAAGAAGAGGACTGAGAAGCCAGAAGTTAGAGATGCAGCCAGGGAAGCTGCCCTTCGTGAAATTAAGGAGAGAATCAAGAAAACAAAGGATGAGAAGAAGGCTAAGAAAGCCGAAGTTGCAGCTAAGTCGCAAAAGGGAGGGAAAGGCAATGTTTCTAAGGGTGCTATGCCTAAAGGTCCTAAACTCGGCGGTGGAGGCGGGAAACGCTGA 492 0.4715 MVLKTELCRFSGAKIYPGKGIRFVRGDSQVFLFANSKCKRYFHNRLKPSKLTWTAMYRKQHKKDIAQEAVKKRRRAAKKPYSRSIVGATLEVIQKKRTEKPEVRDAAREAALREIKERIKKTKDEKKAKKAEVAAKSQKGGKGNVSKGAMPKGPKLGGGGGKR* 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g02671 163 CDD Ribosomal_L24e_L24 3 56 IPR000988 -
Phac1g02671 163 Pfam Ribosomal protein L24e 4 67 IPR000988 -
Phac1g02671 163 FunFam 60S ribosomal protein L24 3 64 - -
Phac1g02671 163 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 6 58 - -
Phac1g02671 163 Coils Coil 112 139 - -
Phac1g02671 163 Gene3D - 69 138 - -
Phac1g02671 163 SMART 4TRASH 8 46 IPR011017 -
Phac1g02671 163 PANTHER 60S RIBOSOMAL PROTEIN L24 4 155 IPR000988 -
Phac1g02671 163 ProSitePatterns Ribosomal protein L24e signature. 10 27 IPR023442 -
Phac1g02671 163 Gene3D Ribosomal protein L24e 3 64 IPR038630 -
Phac1g02671 163 MobiDBLite consensus disorder prediction 118 136 - -
Phac1g02671 163 MobiDBLite consensus disorder prediction 118 163 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g02671 Phac-Chr1 36071727 36073785 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac1g02671 1 156 Cytoplasmic Ribosomal Protein Gene Family AT2G36620 84.076 8.34e-85 244
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g02671 K02896 - gmx:100499720 243.047