Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g02653 ATGGACACAGTTCTGGTACCTCCTTGGCTTGAGCAGCTTCTTCACACACCTTTCTTCAATGTTTGTCGAATTCACGCAGACGCAGCTAGGAGTGAATGTAACATGTTTTGTCTAGATTGCAGTGGCGAAGCCTTCTGTTTCTATTGTCGTTCTTCTCGACACAAAGATCATGGAGTGATTCAGATAAGAAGATCTTCGTATCATGATGTAGTGAGGGTGGGTGAAATTGAGAGGGTGTTGGACATAAGTGGAGTGCAGACATATGTGATAAACAGTGCTAGAGTTTTGTTCTTGAATGTGAGGCCTCAACCAAAATCTGGGAAAGGAGTAGCTCACATTTGTGAGATTTGTGGAAGGAGCCTCTTGGACCCATTTCGCTTCTGTTCTTTGGGATGTAAGGTGAAACAAATACTATTAATCTTCTTATCATTATATTTTTGCCATATTCTTCATTTCATTATCAACATGCACATCATTCACAACTCAATCATCCTCATCATATGGGTATAA 510 0.4039 MDTVLVPPWLEQLLHTPFFNVCRIHADAARSECNMFCLDCSGEAFCFYCRSSRHKDHGVIQIRRSSYHDVVRVGEIERVLDISGVQTYVINSARVLFLNVRPQPKSGKGVAHICEICGRSLLDPFRFCSLGCKVKQILLIFLSLYFCHILHFIINMHIIHNSIILIIWV* 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g02653 169 Pfam PLATZ transcription factor 63 134 IPR006734 -
Phac1g02653 169 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 5 133 - -
Phac1g02653 169 SUPERFAMILY B-box zinc-binding domain 16 63 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g02653 Phac-Chr1 35928466 35930713 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Phac1g02653 PLATZ 2.4e-28 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g02653 - - gmx:100803083 263.848