Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g02652 ATGGACACAGTTCTGGTACCTCCTTGGCTTGAGCAGCTTCTTCACACACCTTTCTTCAATGTTTGTCGAATTCACGCAGACGCAGCTAGGAGTGAATGTAACATGTTTTGTCTAGATTGCAGTGGCGAAGCCTTCTGTTTCTATTGTCGTTCTTCTCGACACAAAGATCATGGAGTGATTCAGATAAGAAGATCTTCGTATCATGATGTAGTGAGGGTGGGTGAAATTGAGAGGGTGTTGGACATAAGTGGAGTGCAGACATATGTGATAAACAGTGCTAGAGTTTTGTTCTTGAATGTGAGGCCTCAACCAAAATCTGGGAAAGGAGTAGCTCACATTTGTGAGATTTGTGGAAGGAGCCTCTTGGACCCATTTCGCTTCTGTTCTTTGGGATGTAAGCTTGAAGGAATAAAGAAAAATGGGGATTCAAGCTTTGGTTTGGATGGTAGGAATAATGATGAATTGACAATGGAGACTACTACTACTACTTCAACTTCAAGAGGATCAATCTCATCAAGACAGCAAGAAGAAGGATTGCGTGAAGGTTCAACACAAGATATGTATCCAGCCACACCTCCTTCAAACGCAAGGAGAAGAAAAGGAATTCCTCATAGAGCTCCCTTTGCCTCCTAA 633 0.4265 MDTVLVPPWLEQLLHTPFFNVCRIHADAARSECNMFCLDCSGEAFCFYCRSSRHKDHGVIQIRRSSYHDVVRVGEIERVLDISGVQTYVINSARVLFLNVRPQPKSGKGVAHICEICGRSLLDPFRFCSLGCKLEGIKKNGDSSFGLDGRNNDELTMETTTTTSTSRGSISSRQQEEGLREGSTQDMYPATPPSNARRRKGIPHRAPFAS* 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g02652 210 MobiDBLite consensus disorder prediction 143 210 - -
Phac1g02652 210 MobiDBLite consensus disorder prediction 145 178 - -
Phac1g02652 210 Pfam PLATZ transcription factor 63 134 IPR006734 -
Phac1g02652 210 SUPERFAMILY B-box zinc-binding domain 16 63 - -
Phac1g02652 210 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 5 208 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g02652 Phac-Chr1 35928466 35930713 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Phac1g02652 PLATZ 5.6e-28 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g02652 - - gmx:100803076 370.163