Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Phac1g02651 | ATGAACTCCTATGTCACCCCTCTCATTATCTCCACTGCTGGCATAGTTTGTTCTACAGTAGCGATAGCAGTGTACCACTGCATCCTCTTGAGGTATTTCGTTAGAACTCAGATAGCACAACACAGGGACAACATAACAAACACAAGTTATGTAAAGAGTGAAGGGGTCCAAGAAGAAATCCTTAACAAAATCCCAGTTTTCTCAATCTCTACACAAACAAGTAGTGCTGTCAATGCCATTCATTTGGACCAAAATATTGAATGCTCTATTTGCCTTGGACAATGGGAAGATGAGGATGTGGTGCGGTTGTTGCCTTCTTGTTATCATGTTTTCCATAAATCCTGCATTGATGCATGGTTCATGGACCATGCCAATTGCCCAGTTTGTCGGTCACCAATCACTTGTGATTGTGAGTTAGCCTTGCCAATCGCTTCACAAAATGATGGTGATGCCTAA | 456 | 0.4211 | MNSYVTPLIISTAGIVCSTVAIAVYHCILLRYFVRTQIAQHRDNITNTSYVKSEGVQEEILNKIPVFSISTQTSSAVNAIHLDQNIECSICLGQWEDEDVVRLLPSCYHVFHKSCIDAWFMDHANCPVCRSPITCDCELALPIASQNDGDA* | 152 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Phac1g02651 | 151 | ProSiteProfiles | Zinc finger RING-type profile. | 88 | 130 | IPR001841 | - | |
Phac1g02651 | 151 | Pfam | Ring finger domain | 87 | 130 | IPR001841 | - | |
Phac1g02651 | 151 | SMART | ring_2 | 88 | 129 | IPR001841 | - | |
Phac1g02651 | 151 | PANTHER | E3 UBIQUITIN-PROTEIN LIGASE ATL42 | 10 | 139 | - | - | |
Phac1g02651 | 151 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 40 | 135 | IPR013083 | - | |
Phac1g02651 | 151 | SUPERFAMILY | RING/U-box | 70 | 136 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Phac1g02651 | Phac-Chr1 | 35922832 | 35923287 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Phac1g02651 | 48 | 131 | Rapid Response to Elicitors | AT3G16720 | 42.857 | 1.38e-19 | 81.3 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Phac1g02651 | - | - | vra:106756930 | 228.794 |