Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g02648 ATGATGGGATTCAACAGAAACCTCTTCTGGCTTTCTGGCTTTGTGATTTTTCTCTTTTCTATCTCATTTGTTCTTTATTCCACTTCACCTTCCCCGAGCAATAACACGGCCATTAGTCCTCAAGATAGTTTCAGTTTCCAGCTTGGTATATTTAGCAAGATTATAAAGCTTAGTGGCGCTCAAGACTTGGTATCTCTGATAACAAGTATAGCTAGGAGGAGACATCGTCACCATCATCATCACCGGGGAAGACATAAGGAAAAATGTGACGGGGCCAAGTGGGATTCCAGGCTTATTCAACACTATAACGTGAGTCTTGTTTTCACGGTTGACTTGAAGGGCTGTGCTAACTTCAGTAGCGTTCAAAAAGCTGTTGATGCTGTTCCTGAATCTAGCTCTGATACCACCCTTATCATAATCGATTCTGGTACATACAGGGAGAAGGTAGTTGTGCAAGGCAACAAAACAAACTTAATAATTCAAGGTCAAGGGTATCTGAATACAATCGTTGAATGGAACGACACCGCCAATTCCACCGGCGGAACTTCATACAGCTACTCATTTGCCATCTTTGCTTCTATGTTCACTGCTTACAACATCAGCTTTAAGAACACGGCTCCTCCACCGTCACCAGGAGTGGTTGGGGCACAAGCAGTGGCACTGAGAGTTACCGGTGATAAAGCAGCTTTCTATGGATGTGGATTTTATGGTGCGCAGGATACATTGAATGATGATGGTGGAAGACATTACTTTAAAGAATGCTTAATCCAAGGATCCATTGATTTCATATTTGGAAATGGCAGATCCCTTTATGAGGATTGTACCATAAACTGTGTAGCAAAAGAAGAGAAGGATGAGATTAGCGGGTCGATCACCGCTCAAGGGAGGAAATCGATGGATGAAGAAAGTGGGTTCTCGTTTGTGAATTGTAGCATTGTTGGGAGTGGAAGAGTGTGGCTTGGAAGAGCTTGGGGACCCTATGCCACTGTCATCTTCTCAACAACATACATGTCTGATGTCATAGCCCCTGAAGGATGGAATGATTGGAGAGATCCCTCTAGAGACCAGAGCGTGTTCTTTGGGGAGTACCGTTGCCATGGACCTGGAGCAAATTATGAATCTAGAGTCTCTTATGCTAAGCAACTCAGGGATAACGAAGCAAACTCCTACATGGATATTTCCTACATTGATGGAAATGATTGGCTTCTTAGTTATCCTCAAAGCTATGTTAACCCTTCATATATCTAA 1248 0.4311 MMGFNRNLFWLSGFVIFLFSISFVLYSTSPSPSNNTAISPQDSFSFQLGIFSKIIKLSGAQDLVSLITSIARRRHRHHHHHRGRHKEKCDGAKWDSRLIQHYNVSLVFTVDLKGCANFSSVQKAVDAVPESSSDTTLIIIDSGTYREKVVVQGNKTNLIIQGQGYLNTIVEWNDTANSTGGTSYSYSFAIFASMFTAYNISFKNTAPPPSPGVVGAQAVALRVTGDKAAFYGCGFYGAQDTLNDDGGRHYFKECLIQGSIDFIFGNGRSLYEDCTINCVAKEEKDEISGSITAQGRKSMDEESGFSFVNCSIVGSGRVWLGRAWGPYATVIFSTTYMSDVIAPEGWNDWRDPSRDQSVFFGEYRCHGPGANYESRVSYAKQLRDNEANSYMDISYIDGNDWLLSYPQSYVNPSYI* 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g02648 415 Pfam Pectinesterase 110 399 IPR000070 GO:0030599|GO:0042545
Phac1g02648 415 SUPERFAMILY Pectin lyase-like 105 404 IPR011050 -
Phac1g02648 415 ProSitePatterns Pectinesterase signature 2. 256 265 IPR033131 -
Phac1g02648 415 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 99 402 - -
Phac1g02648 415 Gene3D - 102 409 IPR012334 -
Phac1g02648 415 FunFam Pectinesterase 102 407 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g02648 Phac-Chr1 35882422 35887547 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac1g02648 108 402 Carbohydrate Esterase AT1G05310 55.705 1.01e-119 352
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g02648 - - vun:114181275 744.577