Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g02647 ATGATGGGATTCAACAGAAACCTCTTCTGGCTTTCTGGCTTTGTGATTTTTCTCTTTTCTATCTCATTTGTTCTTTATTCCACTTCACCTTCCCCGAGCAATAACACGGCCATTAGTCCTCAAGATAGTTTCAGTTTCCAGCTTGGTATATTTAGCAAGATTATAAAGCTTAGTGGCGCTCAAGACTTGGTATCTCTGATAACAAGTATAGCTAGGAGGAGACATCGTCACCATCATCATCACCGGGGAAGACATAAGGAAAAATGTGACGGGGCCAAGTGGGATTCCAGGCTTATTCAACACTATAACGTGAGTCTTGTTTTCACGGTTGACTTGAAGGGCTGTGCTAACTTCAGTAGCGTTCAAAAAGCTGTTGATGCTGTTCCTGAATCTAGCTCTGATACCACCCTTATCATAATCGATTCTGGTACATACAGGGAGAAGGTAGTTGTGCAAGGCAACAAAACAAACTTAATAATTCAAGGTCAAGGGTATCTGAATACAATCGTTGAATGGAACGACACCGCCAATTCCACCGGCGGAACTTCATACAGCTACTCATTTGCCATCTTTGCTTCTATGTTCACTGCTTACAACATCAGCTTTAAGGATACATTGAATGATGATGGTGGAAGACATTACTTTAAAGAATGCTTAATCCAAGGATCCATTGATTTCATATTTGGAAATGGCAGATCCCTTTATGAGGATTGTACCATAAACTGTGTAGCAAAAGAAGAGAAGGATGAGATTAGCGGGTCGATCACCGCTCAAGGGAGGAAATCGATGGATGAAGAAAGTGGGTTCTCGTTTGTGAATTGTAGCATTGTTGGGAGTGGAAGAGTGTGGCTTGGAAGAGCTTGGGGACCCTATGCCACTGTCATCTTCTCAACAACATACATGTCTGATGTCATAGCCCCTGAAGGATGGAATGATTGGAGAGATCCCTCTAGAGACCAGAGCGTGTTCTTTGGGGAGTACCGTTGCCATGGACCTGGAGCAAATTATGAATCTAGAGTCTCTTATGCTAAGCAACTCAGGGATAACGAAGCAAACTCCTACATGGATATTTCCTACATTGATGGAAATGATTGGCTTCTTAGTTATCCTCAAAGCTATGTTAACCCTTCATATATCTAA 1140 0.4211 MMGFNRNLFWLSGFVIFLFSISFVLYSTSPSPSNNTAISPQDSFSFQLGIFSKIIKLSGAQDLVSLITSIARRRHRHHHHHRGRHKEKCDGAKWDSRLIQHYNVSLVFTVDLKGCANFSSVQKAVDAVPESSSDTTLIIIDSGTYREKVVVQGNKTNLIIQGQGYLNTIVEWNDTANSTGGTSYSYSFAIFASMFTAYNISFKDTLNDDGGRHYFKECLIQGSIDFIFGNGRSLYEDCTINCVAKEEKDEISGSITAQGRKSMDEESGFSFVNCSIVGSGRVWLGRAWGPYATVIFSTTYMSDVIAPEGWNDWRDPSRDQSVFFGEYRCHGPGANYESRVSYAKQLRDNEANSYMDISYIDGNDWLLSYPQSYVNPSYI* 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g02647 379 Gene3D - 205 374 IPR012334 -
Phac1g02647 379 Gene3D - 102 204 IPR012334 -
Phac1g02647 379 Pfam Pectinesterase 201 363 IPR000070 GO:0030599|GO:0042545
Phac1g02647 379 ProSitePatterns Pectinesterase signature 2. 220 229 IPR033131 -
Phac1g02647 379 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 202 366 - -
Phac1g02647 379 SUPERFAMILY Pectin lyase-like 105 368 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g02647 Phac-Chr1 35882422 35887547 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac1g02647 108 366 Carbohydrate Esterase AT1G05310 47.315 2.75e-92 280
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g02647 - - vun:114181275 659.448