Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g02604 ATGGGTAGAGCTCCTTGTTGTGACAAGGCAAATGTAAAGAAAGGGCCATGGTCACCAGAAGAAGATGCAAAGCTAAAGGACTACATAGAGCAACATGGCACCGGAGGGAATTGGATTGCCCTCCCACAAAAAGTTGGTTTGAAAAGATGTGGCAAGAGCTGTAGATTAAGGTGGCTTAATTATCTTAGACCCAATATTAAGCATGGTCAATTTTCTGATGCAGAAGATGAAGTAATCTGTAGCCTCTTTGCTAGCATTGGAAGCAGGTGGTCCATAATAGCAGCTCAGCTGCCAGGGAGAACTGACAATGACATCAAGAACTATTGGAACACCAGGCTTAAGAAGAAAATGATGGCCATGAATCCTTCTCCCCAGAGTAAACCTCGTCGAATTACCCTTTTATCCATCCTTGAAAGCTCAACACCATCTTCATCACCATTATCATTCAGAGACAACAGCAACTCATACTACCATCCCCACGGTTCTTTCACAGGCGTCGGCTCCTTTTCCTACACTTCAAGTCTTCTGAGTGGAAACAACTCTTCTGCTTCTGCTGATTCCTTCTTTCAAGCACAAGAGAGTTTCAGAGACCCCACCCAGAAGTGCCAATTCAAAGATAGCAGCAACAATAGTATGTTTGTGTTCGGTGGTGAAGCCACAGCCACTAGTTGCAGCTCTTCTGATGCGAGCTGCAACAACCAGATCAGTCATGTCATGGAGCCAGAATTTGGTGAGGCAAGTTTTGTGGAGCAGATAGGTGTTGCTGATAATCACCTATACAGTGGGGTGGAAAATACTACTCAGAAGTTGATGATGTTCTCCAGTGGCAGTGCTAGTACTGTGAGTGGGTGGACAGACAAACAAAATGGATTGTGGGAACAAAATCCATTGGATTATGGTCTAGAGGAAATTAAACAACTAATTAGCACTAATAGCAATTGCAACAACTTTTTGTTTGATGATAAGAAGACAGAAGAAAGGGTCACGTATTACTGA 996 0.4337 MGRAPCCDKANVKKGPWSPEEDAKLKDYIEQHGTGGNWIALPQKVGLKRCGKSCRLRWLNYLRPNIKHGQFSDAEDEVICSLFASIGSRWSIIAAQLPGRTDNDIKNYWNTRLKKKMMAMNPSPQSKPRRITLLSILESSTPSSSPLSFRDNSNSYYHPHGSFTGVGSFSYTSSLLSGNNSSASADSFFQAQESFRDPTQKCQFKDSSNNSMFVFGGEATATSCSSSDASCNNQISHVMEPEFGEASFVEQIGVADNHLYSGVENTTQKLMMFSSGSASTVSGWTDKQNGLWEQNPLDYGLEEIKQLISTNSNCNNFLFDDKKTEERVTYY* 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g02604 331 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 62 IPR017930 -
Phac1g02604 331 Pfam Myb-like DNA-binding domain 69 111 IPR001005 -
Phac1g02604 331 Pfam Myb-like DNA-binding domain 14 62 IPR001005 -
Phac1g02604 331 ProSiteProfiles Myb-like domain profile. 9 62 IPR001005 -
Phac1g02604 331 PANTHER OS09G0431300 PROTEIN 1 306 - -
Phac1g02604 331 CDD SANT 16 62 IPR001005 -
Phac1g02604 331 SUPERFAMILY Homeodomain-like 11 109 IPR009057 -
Phac1g02604 331 ProSiteProfiles Myb-like domain profile. 63 113 IPR001005 -
Phac1g02604 331 Gene3D - 69 132 - -
Phac1g02604 331 SMART sant 67 115 IPR001005 -
Phac1g02604 331 SMART sant 13 64 IPR001005 -
Phac1g02604 331 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 63 117 IPR017930 -
Phac1g02604 331 FunFam Transcription factor RAX3 7 68 - -
Phac1g02604 331 Gene3D - 7 68 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g02604 Phac-Chr1 35461835 35464079 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac1g02604 1 118 MYB Transcription Factor Family AT5G65790 87.288 4.38e-77 239
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Phac1g02604 Myb_DNA-binding 5.7e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g02604 K09422 - gmx:778084 510.76