Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g02603 ATGTCAAAAGATTCTGAGGAGATAAAAACCATTGAGCAGTGGAAATGGTCCGAAATGCAAGGCCTTGAGCTTGTTCCTGATGCTGCGACTTCACAACAACAACAACAAGATCAAGTTCCAAGGGAAATGGACAGTTCTGAACAACCCAACAAAGAGGCTGGTGCTGCTGCTGCTGCAGTTACTATGAACGGTAGTTCCATTAGTGGGGAGAAGGCAGAGAGTGTTCCCTCTGTTGGGTTTGGAGAGCTTTTCAGATTTGCTGATGGGTTGGATTATGTTCTCATGGGAATTGGAACGGTTGGAGCAGTTGTGCACGGTTGTTCACTGCCTCTCTTTCTTCGCTTCTTTGCGGATCTTGTCAATTCCTTTGGCTCCAATGCTAATGATGTGGACAAGATGACACAGGAAGTGGTTAAGTATGCATTTTACTTCCTGGTGGTGGGGGCTGCTATATGGGCATCTTCCTGGGCAGAGATTTCGTGTTGGATGTGGAGTGGGGAACGTCAATCCACCAAGATGAGAATAAAGTATCTGGAGGCTGCGTTGAACCAGGACATTCAGTTCTTTGACACTGATGTGCGGACTTCCGATGTTGTTTTCGCCATCAACACCGATGCTGTCATGGTCCAGGATGCCATTAGTGAGAAGTTGGGGAATTTCATTCACTACATGGCTACGTTTGTTTCTGGCTTTGTTGTGGGTTTCACTGCTGTGTGGCAATTGGCTTTGGTCACTCTTGCTGTTGTCCCTATGATAGCTGTGATTGGAGGCATTCACACCACCACCTTGGCCAAGCTCTCTGGCAAGAGCCAGGAAGCTCTTTCTCAAGCTGGCAACATTGTGGAACAGACGGTTGCACAAATCCGAGTGGTGCTGGCCTTCGTTGGGGAGTCCAGAGCATTACAGGCCTATTCATCAGCCTTGAGGGTTTCACAGAAGCTTGGTTACAAAACTGGGTTTGCAAAGGGAATGGGATTGGGGGCCACTTACTTTGTTGTTTTCTGCTGTTATGCGCTTCTGCTGTGGTATGGAGGCTATCTTGTTAGGCACCATGCCACCAATGGAGGACTTGCCATTGCAACCATGTTTGCTGTTATGATTGGTGGATTGGGTTTGGGGCAATCTGCACCAAGCATGGCTGCATTTACAAAGGCCAGAGTTGCTGCTGCAAAGATTTTCCGTATAATTGATCACAAGCCGAGTATTGATCGAAATAGCGAATCTGGCATTGAACTAGAGACTGTTACTGGACTTGTGGAACTGAAAAATGTAGACTTTTCTTACCCATCTAGGCCAGAGGTTCGGATCCTCAATGATTTCTCCTTGAATGTGCCTGCTGGCAAGACCATAGCTCTGGTGGGTAGCAGCGGCTCTGGTAAGAGCACTGTTGTCTCCCTCATTGAGAGATTCTATGACCCATCTTCAGGACAAGTTCTATTAGATGGGCATGACATTAAAACTTTGAAGCTTAGATGGTTGAGGCAGCAGATAGGATTAGTGAGCCAAGAGCCTGCTCTGTTTGCTACCACAATACGAGAAAATATACTGTTGGGTAGGCCTGATGCAAACCAGGTTGAGATTGAAGAAGCTGCCAGGGTTGCTAATGCACATTCCTTCATCATTAAACTTCCTGAAGGCTATGAAACCCAGGTCGGAGAAAGAGGGCTGCAACTTTCTGGAGGGCAAAAACAGAGAATAGCAATAGCAAGGGCAATGTTGAAAAACCCTGCAATTCTTCTCCTAGATGAGGCAACAAGTGCATTGGACTCAGAGTCAGAAAAACTGGTGCAAGAAGCTCTTGACCGGTTCATGATTGGCAGAACAACTCTTGTCATTGCCCATCGCCTCTCCACAATTCGCAAAGCTGATCTTGTAGCTGTACTTCAGCAAGGAAGTGTTTCTGAAATTGGAACTCATGATGAGTTGTTCTCAAAAGGTGAAAATGGAGTCTATGCCAAGCTTATAAAGATGCAGGAGATGGCTCATGAAACTGCTATGAGTAATGCCAGAAAGAGCAGTGCAAGGCCTTCAAGTGCCAGAAACTCTGTCAGCTCACCAATAATTGCTAGGAATTCTTCTTATGGACGGTCACCATACTCGCGTAGGCTGTCTGATTTCTCTACATCTGATTTTAGTCTGTCCCTAGATGCATCACATTCAAATTACAGGCTTGAAAAGCTTGCTTTCAAGGAGCAAGCTAGTTCCTTCTGGAGACTTGCAAAAATGAACTCTCCTGAATGGCTTTATGCTTTAATTGGCTCTATAGGATCCGTTATTTGTGGATCTCTCAGTGCCTTCTTTGCTTATGTTCTTAGCGCTGTCCTCAGTGTGTACTACAATCCAGACCACAGATACATGATCCGTGAAATAGAAAAGTACTGTTACTTGTTGATTGGTCTTTCATCAACCGCACTTCTCTTCAACACACTGCAACACTTCTTCTGGGACATTGTTGGGGAAAATCTTACTAAACGTGTGAGGGAGAAAATGCTTACAGCGGTACTAAAAAATGAAATGGCGTGGTTTGATCAGGAGGAAAATGAGAGTGCCAGGATTGCCGCAAGGCTGGCTCTTGATGCCAACAATGTGAGATCAGCCATTGGAGATCGAATTTCAGTAATTGTGCAGAACACTGCACTTATGCTAGTTGCCTGTACTGCAGGTTTTGTGTTGCAGTGGCGCCTTGCCCTTGTCCTCGTAGCTGTCTTCCCTATTGTTGTTGCAGCCACTGTTTTGCAGAAAATGTTCATGACTGGTTTCTCTGGTGACCTGGAAGCTGCTCATGCCAAGGCTACACAACTTGCAGGAGAAGCTATAGCCAATGTGAGGACTGTTGCAGCCTTCAATTCAGAAACAAAAATTGTTGGTCTTTTCACCTCCAATCTCCAAGCTCCGCTAAAGCGTTGCTTTTGGAAGGGACAAATTTCTGGAAGTGGATATGGTGTAGCTCAGTTTGCACTTTATGCTTCCTATGCACTTGGTCTTTGGTATGCTTCTTGGCTAGTGAAGCATGGCATCTCTGACTTCTCTAAAACAATCCGAGTTTTTATGGTCCTAATGGTTTCTGCAAATGGTGCTGCTGAAACTTTAACTCTTGCTCCTGACTTTATCAAAGGAGGCCGAGCCATGAGGTCAGTCTTTGAACTCCTTGACCGTAGAACTGAAATTGAACCTGATGATCAAGATGCCACTCCTTTTCCTGATCGTCTTCGTGGTGAAGTTGAACTTAAGCATGTAGATTTCGTTTATCCAACTCGCCCTGATATGCCAGTTTTTCGTGACCTCAGTCTTCGTGCAAGGGCTGGTAAAACTCTTGCCCTTGTAGGACCTAGTGGTTGTGGTAAGAGCTCAGTTATTGCACTTATACAGAGATTCTATGATCCAACATCTGGTCGGGTCATGATTGATGGCAAGGACATAAGGAAATACAATCTCAAGTCCTTAAGAAGGCACATTTCAGTGGTACCTCAGGAACCATGCTTGTTTGCTACTACTATTTATGAAAACATTGCTTATGGGCATGAGTCAGCCACTGAAGCTGAGATAATTGAAGCTGCAACTCTTGCCAATGCACACAAGTTCATATCTGCTTTGCCAGATGGATACAAAACATTTGTTGGGGAGAGAGGTGTTCAGCTATCCGGGGGACAAAAGCAAAGAATAGCAGTTGCTCGGGCTTTTGTGAGAAAGGCTGAGCTTATGCTTCTTGATGAGGCCACAAGTGCACTTGATGCTGAATCTGAGAGGTCGGTTCAGGAGGCTTTAGACCGTGCCTCCTCAGGAAAAACAACTATCATTGTTGCACACAGGCTATCAACTATAAGGAATGCCCATCTGATTGCTGTGATTGATGATGGCAAAGTAGCTGAGCAAGGCTCTCATTCACAGTTGTTGAAAAATCACCCGGATGGGATTTATTCACGCATGATTCAGTTGCAAAGGTTCACACACAGCCAAGTCATTGGAATGGCCTCAGGTTCAAGCTCTTCTACAAGACCAAAAGATGATGAAAGAGAAGGCTAG 4023 0.4534 MSKDSEEIKTIEQWKWSEMQGLELVPDAATSQQQQQDQVPREMDSSEQPNKEAGAAAAAVTMNGSSISGEKAESVPSVGFGELFRFADGLDYVLMGIGTVGAVVHGCSLPLFLRFFADLVNSFGSNANDVDKMTQEVVKYAFYFLVVGAAIWASSWAEISCWMWSGERQSTKMRIKYLEAALNQDIQFFDTDVRTSDVVFAINTDAVMVQDAISEKLGNFIHYMATFVSGFVVGFTAVWQLALVTLAVVPMIAVIGGIHTTTLAKLSGKSQEALSQAGNIVEQTVAQIRVVLAFVGESRALQAYSSALRVSQKLGYKTGFAKGMGLGATYFVVFCCYALLLWYGGYLVRHHATNGGLAIATMFAVMIGGLGLGQSAPSMAAFTKARVAAAKIFRIIDHKPSIDRNSESGIELETVTGLVELKNVDFSYPSRPEVRILNDFSLNVPAGKTIALVGSSGSGKSTVVSLIERFYDPSSGQVLLDGHDIKTLKLRWLRQQIGLVSQEPALFATTIRENILLGRPDANQVEIEEAARVANAHSFIIKLPEGYETQVGERGLQLSGGQKQRIAIARAMLKNPAILLLDEATSALDSESEKLVQEALDRFMIGRTTLVIAHRLSTIRKADLVAVLQQGSVSEIGTHDELFSKGENGVYAKLIKMQEMAHETAMSNARKSSARPSSARNSVSSPIIARNSSYGRSPYSRRLSDFSTSDFSLSLDASHSNYRLEKLAFKEQASSFWRLAKMNSPEWLYALIGSIGSVICGSLSAFFAYVLSAVLSVYYNPDHRYMIREIEKYCYLLIGLSSTALLFNTLQHFFWDIVGENLTKRVREKMLTAVLKNEMAWFDQEENESARIAARLALDANNVRSAIGDRISVIVQNTALMLVACTAGFVLQWRLALVLVAVFPIVVAATVLQKMFMTGFSGDLEAAHAKATQLAGEAIANVRTVAAFNSETKIVGLFTSNLQAPLKRCFWKGQISGSGYGVAQFALYASYALGLWYASWLVKHGISDFSKTIRVFMVLMVSANGAAETLTLAPDFIKGGRAMRSVFELLDRRTEIEPDDQDATPFPDRLRGEVELKHVDFVYPTRPDMPVFRDLSLRARAGKTLALVGPSGCGKSSVIALIQRFYDPTSGRVMIDGKDIRKYNLKSLRRHISVVPQEPCLFATTIYENIAYGHESATEAEIIEAATLANAHKFISALPDGYKTFVGERGVQLSGGQKQRIAVARAFVRKAELMLLDEATSALDAESERSVQEALDRASSGKTTIIVAHRLSTIRNAHLIAVIDDGKVAEQGSHSQLLKNHPDGIYSRMIQLQRFTHSQVIGMASGSSSSTRPKDDEREG* 1341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g02603 1340 SUPERFAMILY ABC transporter transmembrane region 738 1058 IPR036640 GO:0005524|GO:0016020
Phac1g02603 1340 ProSitePatterns ABC transporters family signature. 558 572 IPR017871 GO:0005524|GO:0016887
Phac1g02603 1340 ProSitePatterns ABC transporters family signature. 1213 1227 IPR017871 GO:0005524|GO:0016887
Phac1g02603 1340 CDD ABC_MTABC3_MDL1_MDL2 419 658 - -
Phac1g02603 1340 MobiDBLite consensus disorder prediction 26 43 - -
Phac1g02603 1340 SMART AAA_5 1101 1293 IPR003593 GO:0016887
Phac1g02603 1340 SMART AAA_5 446 632 IPR003593 GO:0016887
Phac1g02603 1340 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 419 655 IPR003439 GO:0005524
Phac1g02603 1340 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1065 1313 IPR027417 -
Phac1g02603 1340 Gene3D ABC transporter type 1, transmembrane domain 82 672 IPR036640 GO:0005524|GO:0016020
Phac1g02603 1340 Pfam ABC transporter transmembrane region 96 369 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Phac1g02603 1340 Pfam ABC transporter transmembrane region 752 1021 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Phac1g02603 1340 FunFam ABC transporter B family member 1 409 659 - -
Phac1g02603 1340 FunFam ABC transporter B family member 1 82 417 - -
Phac1g02603 1340 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 97 384 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Phac1g02603 1340 FunFam ABC transporter B family member 19 1040 1062 - -
Phac1g02603 1340 FunFam ABC transporter B family member 1 730 1039 - -
Phac1g02603 1340 FunFam ABC transporter B family member 1 1064 1314 - -
Phac1g02603 1340 CDD ABC_MTABC3_MDL1_MDL2 1074 1313 - -
Phac1g02603 1340 CDD ABC_6TM_Pgp_ABCB1_D1_like 95 392 - -
Phac1g02603 1340 Gene3D ABC transporter type 1, transmembrane domain 1040 1317 IPR036640 GO:0005524|GO:0016020
Phac1g02603 1340 PANTHER ABC TRANSPORTER B FAMILY 68 800 IPR039421 -
Phac1g02603 1340 Pfam ABC transporter 437 586 IPR003439 GO:0005524
Phac1g02603 1340 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 751 1038 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Phac1g02603 1340 MobiDBLite consensus disorder prediction 25 55 - -
Phac1g02603 1340 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1074 1310 IPR003439 GO:0005524
Phac1g02603 1340 SUPERFAMILY ABC transporter transmembrane region 83 403 IPR036640 GO:0005524|GO:0016020
Phac1g02603 1340 Pfam ABC transporter 1093 1241 IPR003439 GO:0005524
Phac1g02603 1340 Gene3D ABC transporter type 1, transmembrane domain 730 1039 IPR036640 GO:0005524|GO:0016020
Phac1g02603 1340 Gene3D - 409 659 IPR027417 -
Phac1g02603 1340 Gene3D - 1063 1314 IPR027417 -
Phac1g02603 1340 MobiDBLite consensus disorder prediction 1321 1340 - -
Phac1g02603 1340 CDD ABC_6TM_Pgp_ABCB1_D2_like 740 1056 - -
Phac1g02603 1340 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 410 658 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g02603 Phac-Chr1 35431745 35439362 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac1g02603 70 1335 Calmodulin-binding Proteins AT2G36910 89.897 0.0 2331
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g02603 K05658 - gmx:100814667 2442.92