Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g02593 ATGAAGTGTTTTACATTCTCCTATGGAGAGAAGAAAGATGAGCCAAAAGGCTTTAGGTCAACATCGGGCCGGTCAGAGAATTCTACGTGTGCTGATATTAGAAGATCTGGTTCCGAGTTAAATTCTCAAGAAGCTTCAGACAGTGGCAGCACAGAATCCCTCAGGAGGAATGCAATACCCAGTTTGTCCCAGAGGCCCAGCAACCTCAGAGTTTTTACTGTTTCTGAACTGAAATCAGCCACAAGGAATTTCAGTCGCTCTGTTAAGATTGGAGAGGGCGGATTTGGGTGTGTCTACCTGGGATTGATTAAAAGTGTGGAGGTTCCCTCTGGAAGAATTGAAGTTGCAGTTAAACAGCTTAGTAAAAGGGGAATGCAGGGGCACAGGGAATGGGTGACAGAAGTGAATGTTCTGGGCGTTGTTGAGCATCCGAATCTTGTGAAACTAGTGGGTTATTGTGCAGATGATGATGAAAGAGGAATCCAGCGGCTTCTGATTTATGAATACATGCCAAACAGAAGTGTGGAAGACCATTTATCCCACCGATCAGAGGCTCCTCTTTCATGGAGTAGGAGATTGAAAATAGCTCGAGATGCAGCTCGTGGATTAACATACCTGCATGAAGAAATGGATTTTCAGATAATTTTCAGAGATTTCAAATCTTCAAATATCCTTTTGGATGAACAATGGAATGCAAAGCTGTCAGACTTTGGGTTGGCAAGGTTGGGACCATCAGATGGACTGACTCATGTCTCAACTGCGGTTGTGGGAACAATGGGATATGCATCTCCGGAATATATTCAAACTGGACGTCTAACATCAAAGAATGATGTGTGGAGCTACGGTGTCTTCCTTTATGAACTTATCACCGGTAGGCGCCCTTTAGATCGAAATCGCCCCAGGGGTGAGCAGAAGCTCTTGGAATGGATAAGACCATACCTATCAGATGGGAAGAAATTTCAACTAATATTAGACCCAAGACTTGATAAGAAACAAATATTCAAATCAGCCCATAGACTTGCTATGATAGCAAACCGATGCTTGGTAAAAAATCCAAAGAATCGCCCAAAGATGAGTGAGGTATTGGAAATGGTCAATGGGATGGTAGAATCTTCATCCCGTTCTAGTCCACCATTACCCTTGAGGAGTGTGGCAAGAGTGGAAACTTCCCAGGATACTGAAACAAATAACAAGAAACGGACCATGGATCAGAAGCCTGGAGAAAGTAATTGGTTTGTTAGGATGTGGAGACCAAAGCTTGTAAGAACATGTTGA 1275 0.4337 MKCFTFSYGEKKDEPKGFRSTSGRSENSTCADIRRSGSELNSQEASDSGSTESLRRNAIPSLSQRPSNLRVFTVSELKSATRNFSRSVKIGEGGFGCVYLGLIKSVEVPSGRIEVAVKQLSKRGMQGHREWVTEVNVLGVVEHPNLVKLVGYCADDDERGIQRLLIYEYMPNRSVEDHLSHRSEAPLSWSRRLKIARDAARGLTYLHEEMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPSDGLTHVSTAVVGTMGYASPEYIQTGRLTSKNDVWSYGVFLYELITGRRPLDRNRPRGEQKLLEWIRPYLSDGKKFQLILDPRLDKKQIFKSAHRLAMIANRCLVKNPKNRPKMSEVLEMVNGMVESSSRSSPPLPLRSVARVETSQDTETNNKKRTMDQKPGESNWFVRMWRPKLVRTC* 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g02593 424 MobiDBLite consensus disorder prediction 1 20 - -
Phac1g02593 424 ProSiteProfiles Protein kinase domain profile. 84 369 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac1g02593 424 PANTHER OS01G0588500 PROTEIN-RELATED 47 366 - -
Phac1g02593 424 Gene3D Phosphorylase Kinase; domain 1 64 169 - -
Phac1g02593 424 FunFam Serine/threonine-protein kinase BIK1 51 169 - -
Phac1g02593 424 MobiDBLite consensus disorder prediction 21 60 - -
Phac1g02593 424 MobiDBLite consensus disorder prediction 370 407 - -
Phac1g02593 424 FunFam Serine/threonine-protein kinase PCRK2 170 378 - -
Phac1g02593 424 Pfam Protein tyrosine and serine/threonine kinase 88 363 IPR001245 GO:0004672|GO:0006468
Phac1g02593 424 SUPERFAMILY Protein kinase-like (PK-like) 61 365 IPR011009 -
Phac1g02593 424 Gene3D Transferase(Phosphotransferase) domain 1 170 378 - -
Phac1g02593 424 CDD STKc_IRAK 90 368 - -
Phac1g02593 424 MobiDBLite consensus disorder prediction 1 60 - -
Phac1g02593 424 ProSitePatterns Protein kinases ATP-binding region signature. 90 118 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g02593 Phac-Chr1 35306397 35312301 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac1g02593 1 380 Glycoside Hydrolase AT3G07070 40.554 1.91e-92 283
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Phac1g02593 Pkinase 3.6e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g02593 - - gmx:100813060 774.622