Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g02588 ATGTTATACAAGGATGGAGGGGATGCCCGTTCTAAGTGCATTGAAGGATTGGCTAAAGAGTATACAAATAATGCCCAAGCAAATTCTCATGTGAAAGATAAAAGCCGGAGCAAGGACGTTGTATGTTCCAATTGCTTGGGTGGTGGAGTACTTTTATGTTGCTCTGGAAAAGGATGCCGGAAGAGGTACCATCCCTCATGTGTGGATCCTCCTCTCAAATACATTCCTTTGAGGTTTTGGCATTGTATCTGGTGCACTAAGAAAAAAATAGAGTTTGGCGTGCATTCGGTTTCTGAAGGAGTGAAATCCATCTTGGATTCTAGAGAAGTGGTTTCAAATAATAAAGTGATGCAAAGGGAGTACTTTGTCAAGTATCAAGGTCTCGCTCATGCTCACAACCGCTGGATTACAGAATCAATAATGCTTCTTGAGGCTCCTAAACTCTTGGCCAAGTTTAAGAGTAAACTGCAGGTTACCAGGTGGAAAAGATATTGGAGTATACCTCACCGCTTACTGCTTAAAAGAGAAATTGTGCATTTTGATGGCCATGGTGACAATGATTCAGTTTGCTGTTATGAGTGGCTTGTCAAATGGACTGGTCTTGGTTATGATAATGCTACATGGGAGTTACAAGATGCTTCATTTTTGACATCAGCCAAAGGCAGGAAACTTATACATGATTATGAAAGTCGTCGAAAGAGAGTTGATAAACTGTCAAAAAGTCATTTTGAAGACAATGAGGAGAGAAAAACTTTCGTTGCTGAATTATTAGTGTTGCCATTTGGATATTCACAAGGACTCTATAACCAGTATTTGAGTTATGTGAACAAGCTTCGCATGAGTTGGCACAAAGGCCAAAATGCTCTTATTGTAGATGATCAAATTGACCAGGAGCGCATTATAAAGGTGATTTTGTTTGTATTATCTTTGAATTGTAATAGCAAGAGGCCTTTTCTCATCATCTCAACTTCCACTGCCCTCTCTGTATGGGAAACAGAGTTCTTACATTTGGCACCATCTGCCAATCTCGTAGTTTACAAGGGAAACAGAGATGTACGGAGTGGCATCAGGGCATTAGAGTTTTTTAATGAAGAAAATGGTATATTATTTCAAATACTGTTGTCATCTTCTGATATTGTTGTTAAGGACTTACATGAACTAAGATGCATTCCATGGGAAGCAATAATAATTGATGAATGCCAGCAATCCAGAATTTCAGGACACTTGGACAGTATCAAGATTCTGAAAACTGAAATGAAGCTCCTTCTTGTTAGTGGACAAATAAAGGAAGATCGATCTGATTATATCAAACTGCTTTCATTCCTCAAGTCTGCACATCATGGGTCAAGTATTACTCCAATAGAAACTTCTTTCAGTGCTAGCATTTCCAATTTGAAGAGCCAATTGGAAAAATATGTTGTATTCAAATGCAAATCTGGCTCTACTAGGTTTGTAGAGTATTGGGTTCCTGCCTGCCTTTCTCATTTGCAGCTTGAGCAGTATTGTTCAATTCTGCTTTCAAACTTAATGTTGTTATGCTCAGGCCAGAAGTCCGACTCAGTTGATGCCCTCCATGAGCTTATTATCTCAACAAGGAAGTGCTGTGATCACCCTTATCTCCTGGAGCCGGCACTGCATAATTCTGTTGTTCAGGGTGTACCTGTTGAAGAACATTTAGATATTGGCATAAAAGCAAGTGGAAAACTGCTACTTCTTGAAAAAATCCTTTTGGAAGCAAGAAGACTTGGGTTAAGGGTGTTAATATTATTTCAGTCAACTAGTGGTTCTGGATCGATTGGAGATATTTTGGATGATGTTCTCTGTCAGAGATTTGGTAAAGATTGCTATGTGCGATATGGTAGAGCTTATACCCCTAAAACAAAGGAAGCCGCTTTAGACACATTTAATGATAGAGACAGTGGAAAATTTGTCTTCTTGATGGAAAACCGTGCTTGTCTCTCTAGTGTTAAGCTTTCTTCAGTGGACACTGTTATATTGTTTGACAGTGATTTTGACCCACAGAATGACCTAAGAGGCTTACAAAGAATGTCTATCAGCTCGCAGTTGAAACAGTTAACCGTTTTCAGGTTGTACTCATATTACACGGTTGAAGAGAAAATTTTAATGCTTGCGAAGGAGGGTATGTCTCTTGACAGTAATGTGCGGTTGATTAGCCAGAGTATTTCTCACACACTTCTAAAATGGGGCACCTCCCATTTGTTCAATAAGCTGGATGATTTACATGCCAGTGTAACTTCTGTTTCTACTCCAGACATTGCAGATCAATCACTTCTACATGATGTACTTTGTGAATTATCATCCCAATTGGTTTGTGGTGCTGATGATATTGATTGTCATGAATGGTCATTCATATCCACAATACAGCAGAATGGAGGGGATTATGCGAGGAACATTCTATTGCTAGGAGAAAGAATAATGAAGGGATTGGGCAGTGAGCCACGTGCTTTTTCCTGGAGTGATCTTGAAGGAAGGTATCCTCAATGGAAATTTTTGTCTGTTTCATCTCAGAGGATGAGGAGTAGGGCCAAACATTCTGATTACATACTAAACGAATCTGAATGTGAAGATCATACAATTATAGGAAAGAGGACATCATCAAATGCTTCCAAGAAGAGAAAAGTGTCCCGGGATAATGTTGATCATAATTTGAAGAAACGGACCAAGGATAAAGTTGACCCCAATAGGAGGAAAGCGTCCAAGGACGTTGTTGAAACAGAGGGGAGGGAACTGTCAAATCATGCCATTGATCCTAAGACTAGGAAGGTGTTCAATGATATTGTTGATTCTAGGGGCAGGAAAATGTCCAAGAATATTCAACCAAGGTCGAGGAGCAAGAAGAATTCAAGTGTTGCCAATAGAGCAAGTAAATCAAATGGTAGTTCAAATGGTTTGCCTAGTGTACTTGATTCCACAGGGCATCCTTTGGCCAATGCAACTACAGGAGGAACTGCAACAAACATGCAACTTTCAGAGAAAAGGAAACTACATGACGGACCAAATAGCAACAAATTCTTGCCAAAATCGGATGTATCAGGTCTTTGTGACATTCTACATTTTCCGAAAAATGTCAAGGTTGTTGCCCTGAGGATTCTTGAGGACATATTCAAACATTACAATGTTAATTGCCAAGAAGTTTCTACTGTACAGGCTTTTGAAATATCTGTGTGTTGGCTGGCAGCTTCTTTGTTGAAACATGAGATTGATAGGAAGGATTCACTCACTCTAGCAAAACTGTGCTTGAATTTCAATTGCAATGAAGAGGAAGCCACAGATGTCTACTCAGAACTGTGGAAACATGTGAAGAAATTTTCTAATTATATACAGAATGGACTGTGTGCTGAGAAATATAATACAAATGGTGCTTCAGAAACTACCATGCCTGAGCTGAATAATTTGACGGAGGAGAAGCAGAATGATTTTCTGGATACTTGTGTTACAAAACTTGTGAAATCTGTCAATAATGAACATGATCTTACAATGAAATCTCACACAACAGGGGTTTCATGTGACCAGACTTTTACTCTTGGAATTTGTTCATTTCCAAATACACCCGCTAGTTTTCCTGTGGAAGCAATTTCTGTCTCCATGGAGTTTGGCTCCGAAGATGACATCATGGAATCTACGCCCTTAATAGCTGCAGAAGATTCAGCTCTTGAGCACGGGGGTAATGATGTCAACCCTCTTACTGATTATTTGGAAAAACAGAGTCCTATTAGAAGTACAGATATTACACAATCTGATGGCAAAGTTTGTGAAGATCCTCAAGTTTTAATGAATGAATTGGTTGCTATTGAGAATGCTATGAATATGTCTACTCATTCTTTGCAGCTTGACAGTGTTGAGGCAAATGCTGTAACTTCCATTGGTTCTGCTGTTCCTGAGGCCAGACTGTGGGGCAGTGTAATGAGTCCTGTATGTAATGAGTCAATTGGTCTGAAGTTTGCTGAGACAACCTTATATACACAACCATCGGATGCTAATTTGTGGCCGTTGCCTCAGATAGCAACGTCTGATATTCCATCTATTCCGGAGCACAATTCAGCTAGTACTGTCACGCCTCTAGATGATATTTTTTATCATAATCGTGAGGATCATTGTTACGTTCATGAGGCTGAAGTAATATTGGAAACACCAAACGACCTTGTGGAACCAGTTAACTCTTCCTTTGGTTCACCTGTGATACTGCAACCATTCACAAGTGTGGCCATGAATGAAAATATGACACATGTACCTGACAGCTTTACTATTCCTGGATATATGAACAGTGATTATTTTCAACATCATCATGTGGCATCTGAAATATCCCACCTTGCCTACCTAGACTCACTACTGGATGAAATGGAGAGAATAGAAAACACGAATGAAGAAGCCTTCATAGATCCACTACTAATTGAAATGGAGAGAATAGAAAAGGATAATGAAGAAGCCTTCAAGATACATGAGCAGAAGATATCGCTGCTTCGATCTGAATTTGAAAAGGAGGTTGAAAAATTGAGTGAAAAGTACAGGATTTTGCTTCAGAATGTTGATACTGAAGGAGCACTAAAAAAAATGGAACTTGAGACACAATGTAAGTTAGTGTTGAGCAGTGAGGTATTAGCTGAAGTTTGGATTCATATGCTTGATGGTTGTGAAAGGGCTGTGGGACAATGCTCAGAACAAGAGAGGAATGCCTAG 4698 0.3944 MLYKDGGDARSKCIEGLAKEYTNNAQANSHVKDKSRSKDVVCSNCLGGGVLLCCSGKGCRKRYHPSCVDPPLKYIPLRFWHCIWCTKKKIEFGVHSVSEGVKSILDSREVVSNNKVMQREYFVKYQGLAHAHNRWITESIMLLEAPKLLAKFKSKLQVTRWKRYWSIPHRLLLKREIVHFDGHGDNDSVCCYEWLVKWTGLGYDNATWELQDASFLTSAKGRKLIHDYESRRKRVDKLSKSHFEDNEERKTFVAELLVLPFGYSQGLYNQYLSYVNKLRMSWHKGQNALIVDDQIDQERIIKVILFVLSLNCNSKRPFLIISTSTALSVWETEFLHLAPSANLVVYKGNRDVRSGIRALEFFNEENGILFQILLSSSDIVVKDLHELRCIPWEAIIIDECQQSRISGHLDSIKILKTEMKLLLVSGQIKEDRSDYIKLLSFLKSAHHGSSITPIETSFSASISNLKSQLEKYVVFKCKSGSTRFVEYWVPACLSHLQLEQYCSILLSNLMLLCSGQKSDSVDALHELIISTRKCCDHPYLLEPALHNSVVQGVPVEEHLDIGIKASGKLLLLEKILLEARRLGLRVLILFQSTSGSGSIGDILDDVLCQRFGKDCYVRYGRAYTPKTKEAALDTFNDRDSGKFVFLMENRACLSSVKLSSVDTVILFDSDFDPQNDLRGLQRMSISSQLKQLTVFRLYSYYTVEEKILMLAKEGMSLDSNVRLISQSISHTLLKWGTSHLFNKLDDLHASVTSVSTPDIADQSLLHDVLCELSSQLVCGADDIDCHEWSFISTIQQNGGDYARNILLLGERIMKGLGSEPRAFSWSDLEGRYPQWKFLSVSSQRMRSRAKHSDYILNESECEDHTIIGKRTSSNASKKRKVSRDNVDHNLKKRTKDKVDPNRRKASKDVVETEGRELSNHAIDPKTRKVFNDIVDSRGRKMSKNIQPRSRSKKNSSVANRASKSNGSSNGLPSVLDSTGHPLANATTGGTATNMQLSEKRKLHDGPNSNKFLPKSDVSGLCDILHFPKNVKVVALRILEDIFKHYNVNCQEVSTVQAFEISVCWLAASLLKHEIDRKDSLTLAKLCLNFNCNEEEATDVYSELWKHVKKFSNYIQNGLCAEKYNTNGASETTMPELNNLTEEKQNDFLDTCVTKLVKSVNNEHDLTMKSHTTGVSCDQTFTLGICSFPNTPASFPVEAISVSMEFGSEDDIMESTPLIAAEDSALEHGGNDVNPLTDYLEKQSPIRSTDITQSDGKVCEDPQVLMNELVAIENAMNMSTHSLQLDSVEANAVTSIGSAVPEARLWGSVMSPVCNESIGLKFAETTLYTQPSDANLWPLPQIATSDIPSIPEHNSASTVTPLDDIFYHNREDHCYVHEAEVILETPNDLVEPVNSSFGSPVILQPFTSVAMNENMTHVPDSFTIPGYMNSDYFQHHHVASEISHLAYLDSLLDEMERIENTNEEAFIDPLLIEMERIEKDNEEAFKIHEQKISLLRSEFEKEVEKLSEKYRILLQNVDTEGALKKMELETQCKLVLSSEVLAEVWIHMLDGCERAVGQCSEQERNA* 1566
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g02588 1565 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 571 736 IPR001650 -
Phac1g02588 1565 SMART chromo_7 164 233 IPR000953 -
Phac1g02588 1565 SMART chromo_7 98 157 IPR000953 -
Phac1g02588 1565 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 17 95 IPR013083 -
Phac1g02588 1565 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 315 446 IPR027417 -
Phac1g02588 1565 MobiDBLite consensus disorder prediction 867 993 - -
Phac1g02588 1565 MobiDBLite consensus disorder prediction 948 993 - -
Phac1g02588 1565 Gene3D - 1465 1546 - -
Phac1g02588 1565 ProSitePatterns Zinc finger PHD-type signature. 42 85 IPR019786 -
Phac1g02588 1565 SUPERFAMILY Chromo domain-like 60 155 IPR016197 -
Phac1g02588 1565 Coils Coil 1447 1467 - -
Phac1g02588 1565 Coils Coil 1495 1515 - -
Phac1g02588 1565 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 279 446 IPR014001 -
Phac1g02588 1565 PANTHER CHROMODOMAIN-HELICASE-DNA-BINDING PROTEIN 3-RELATED-RELATED 98 1096 - -
Phac1g02588 1565 SMART PHD_3 41 86 IPR001965 -
Phac1g02588 1565 SUPERFAMILY Chromo domain-like 168 231 IPR016197 -
Phac1g02588 1565 MobiDBLite consensus disorder prediction 877 942 - -
Phac1g02588 1565 Pfam SNF2-related domain 268 540 IPR000330 GO:0005524|GO:0140658
Phac1g02588 1565 Gene3D - 484 718 IPR027417 -
Phac1g02588 1565 ProSiteProfiles Chromo and chromo shadow domain profile. 99 164 IPR000953 -
Phac1g02588 1565 Gene3D - 267 483 IPR038718 -
Phac1g02588 1565 Gene3D - 100 156 - -
Phac1g02588 1565 Gene3D - 160 231 - -
Phac1g02588 1565 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 485 721 IPR027417 -
Phac1g02588 1565 ProSiteProfiles Zinc finger PHD-type profile. 39 88 IPR019787 -
Phac1g02588 1565 SUPERFAMILY FYVE/PHD zinc finger 31 89 IPR011011 -
Phac1g02588 1565 Pfam Chromo (CHRromatin Organisation MOdifier) domain 101 155 IPR023780 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g02588 Phac-Chr1 35237431 35259374 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SNF2 Phac1g02588 SNF2_N 2.6e-08 CL0023
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g02588 - K11643 gmx:100813574 2092.78