Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g02586 ATGCAAAGGGAGTACTTTGTCAAGTATCAAGGTCTCGCTCATGCTCACAACCGCTGGATTACAGAATCAATAATGCTTCTTGAGGCTCCTAAACTCTTGGCCAAGTTTAAGAGTAAACTGCAGGTTACCAGGTGGAAAAGATATTGGAGTATACCTCACCGCTTACTGCTTAAAAGAGAAATTGTGCATTTTGATGGCCATGGTGACAATGATTCAGTTTGCTGTTATGAGTGGCTTGTCAAATGGACTGGTCTTGGTTATGATAATGCTACATGGGAGTTACAAGATGCTTCATTTTTGACATCAGCCAAAGGCAGGAAACTTATACATGATTATGAAAGTCGTCGAAAGAGAGTTGATAAACTGTCAAAAAGTCATTTTGAAGACAATGAGGAGAGAAAAACTTTCGTTGCTGAATTATTAGTGTTGCCATTTGGATATTCACAAGGACTCTATAACCAGTATTTGAGTTATGTGAACAAGCTTCGCATGAGTTGGCACAAAGGCCAAAATGCTCTTATTGTAGATGATCAAATTGACCAGGAGCGCATTATAAAGGTGATTTTGTTTGTATTATCTTTGAATTGTAATAGCAAGAGGCCTTTTCTCATCATCTCAACTTCCACTGCCCTCTCTGTATGGGAAACAGAGTTCTTACATTTGGCACCATCTGCCAATCTCGTAGTTTACAAGGGAAACAGAGATGTACGGAGTGGCATCAGGGCATTAGAGTTTTTTAATGAAGAAAATGGTATATTATTTCAAATACTGTTGTCATCTTCTGATATTGTTGTTAAGGACTTACATGAACTAAGATGCATTCCATGGGAAGCAATAATAATTGATGAATGCCAGCAATCCAGAATTTCAGGACACTTGGACAGTATCAAGATTCTGAAAACTGAAATGAAGCTCCTTCTTGTTAGTGGACAAATAAAGGAAGATCGATCTGATTATATCAAACTGCTTTCATTCCTCAAGTCTGCACATCATGGGTCAAGTATTACTCCAATAGAAACTTCTTTCAGTGCTAGCATTTCCAATTTGAAGAGCCAATTGGAAAAATATGTTGTATTCAAATGCAAATCTGGCTCTACTAGGTTTGTAGAGTATTGGGTTCCTGCCTGCCTTTCTCATTTGCAGCTTGAGCAGTATTGTTCAATTCTGCTTTCAAACTTAATGTTGTTATGCTCAGGCCAGAAGTCCGACTCAGTTGATGCCCTCCATGAGCTTATTATCTCAACAAGGAAGTGCTGTGATCACCCTTATCTCCTGGAGCCGGCACTGCATAATTCTGTTGTTCAGGGTGTACCTGTTGAAGAACATTTAGATATTGGCATAAAAGCAAGTGGAAAACTGCTACTTCTTGAAAAAATCCTTTTGGAAGCAAGAAGACTTGGGTTAAGGGTGTTAATATTATTTCAGTCAACTAGTGGTTCTGGATCGATTGGAGATATTTTGGATGATGTTCTCTGTCAGAGATTTGGTAAAGATTGCTATGTGCGATATGGTAGAGCTTATACCCCTAAAACAAAGGAAGCCGCTTTAGACACATTTAATGATAGAGACAGTGGAAAATTTGTCTTCTTGATGGAAAACCGTGCTTGTCTCTCTAGTGTTAAGCTTTCTTCAGTGGACACTGTTATATTGTTTGACAGTGATTTTGACCCACAGAATGACCTAAGAGGCTTACAAAGAATGTCTATCAGCTCGCAGTTGAAACAGTTAACCGTTTTCAGGTTGTACTCATATTACACGGTTGAAGAGAAAATTTTAATGCTTGCGAAGGAGGGTATGTCTCTTGACAGTAATGTGCGGTTGATTAGCCAGAGTATTTCTCACACACTTCTAAAATGGGGCACCTCCCATTTGTTCAATAAGCTGGATGATTTACATGCCAGTGTAACTTCTGTTTCTACTCCAGACATTGCAGATCAATCACTTCTACATGATGTACTTTGTGAATTATCATCCCAATTGGTTTGTGGTGCTGATGATATTGATTGTCATGAATGGTCATTCATATCCACAATACAGCAGAATGGAGGGGATTATGCGAGGAACATTCTATTGCTAGGAGAAAGAATAATGAAGGGATTGGGCAGTGAGCCACGTGCTTTTTCCTGGAGTGATCTTGAAGGAAGGTATCCTCAATGGAAATTTTTGTCTGTTTCATCTCAGAGGATGAGGAGTAGGGCCAAACATTCTGATTACATACTAAACGAATCTGAATGTGAAGATCATACAATTATAGGAAAGAGGACATCATCAAATGCTTCCAAGAAGAGAAAAGTGTCCCGGGATAATGTTGATCATAATTTGAAGAAACGGACCAAGGATAAAGTTGACCCCAATAGGAGGAAAGCGTCCAAGGACGTTGTTGAAACAGAGGGGAGGGAACTGTCAAATCATGCCATTGATCCTAAGACTAGGAAGGTGTTCAATGATATTGTTGATTCTAGGGGCAGGAAAATGTCCAAGAATATTCAACCAAGGTCGAGGAGCAAGAAGAATTCAAGTGTTGCCAATAGAGCAAGTAAATCAAATGGTAGTTCAAATGGTTTGCCTAGTGTACTTGATTCCACAGGGCATCCTTTGGCCAATGCAACTACAGGAGGAACTGCAACAAACATGCAACTTTCAGAGAAAAGGAAACTACATGACGGACCAAATAGCAACAAATTCTTGCCAAAATCGGATGTATCAGGTCTTTGTGACATTCTACATTTTCCGAAAAATGTCAAGGTTGTTGCCCTGAGGATTCTTGAGGACATATTCAAACATTACAATGTTAATTGCCAAGAAGTTTCTACTGTACAGGCTTTTGAAATATCTGTGTGTTGGCTGGCAGCTTCTTTGTTGAAACATGAGATTGATAGGAAGGATTCACTCACTCTAGCAAAACTGTGCTTGAATTTCAATTGCAATGAAGAGGAAGCCACAGATGTCTACTCAGAACTGTGGAAACATGTGAAGAAATTTTCTAATTATATACAGAATGGACTGTGTGCTGAGAAATATAATACAAATGGTGCTTCAGAAACTACCATGCCTGAGCTGAATAATTTGACGGAGGAGAAGCAGAATGATTTTCTGGATACTTGTGTTACAAAACTTGTGAAATCTGTCAATAATGAACATGATCTTACAATGAAATCTCACACAACAGGGGTTTCATGTGACCAGACTTTTACTCTTGGAATTTGTTCATTTCCAAATACACCCGCTAGTTTTCCTGTGGAAGCAATTTCTGTCTCCATGGAGTTTGGCTCCGAAGATGACATCATGGAATCTACGCCCTTAATAGCTGCAGAAGATTCAGCTCTTGAGCACGGGGGTAATGATGTCAACCCTCTTACTGATTATTTGGAAAAACAGAGTCCTATTAGAAGTACAGATATTACACAATCTGATGGCAAAGTTTGTGAAGATCCTCAAGTTTTAATGAATGAATTGGTTGCTATTGAGAATGCTATGAATATGTCTACTCATTCTTTGCAGCTTGACAGTGTTGAGGCAAATGCTGTAACTTCCATTGGTTCTGCTGTTCCTGAGGCCAGACTGTGGGGCAGTGTAATGAGTCCTGTATGTAATGAGTCAATTGGTCTGAAGTTTGCTGAGACAACCTTATATACACAACCATCGGATGCTAATTTGTGGCCGTTGCCTCAGATAGCAACGTCTGATATTCCATCTATTCCGGAGCACAATTCAGCTAGTACTGTCACGCCTCTAGATGATATTTTTTATCATAATCGTGAGGATCATTGTTACGTTCATGAGGCTGAAGTAATATTGGAAACACCAAACGACCTTGTGGAACCAGTTAACTCTTCCTTTGGTTCACCTGTGATACTGCAACCATTCACAAGTGTGGCCATGAATGAAAATATGACACATGTACCTGACAGCTTTACTATTCCTGGATATATGAACAGTGATTATTTTCAACATCATCATGTGGCATCTGAAATATCCCACCTTGCCTACCTAGACTCACTACTGGATGAAATGGAGAGAATAGAAAACACGAATGAAGAAGCCTTCATAGATCCACTACTAATTGAAATGGAGAGAATAGAAAAGGATAATGAAGAAGCCTTCAAGATACATGAGCAGAAGATATCGCTGCTTCGATCTGAATTTGAAAAGGAGGTTGAAAAATTGAGTGAAAAGTACAGGATTTTGCTTCAGAATGTTGATACTGAAGGAGCACTAAAAAAAATGGAACTTGAGACACAATGTAAGTTAGTGTTGAGCAGTGAGGTATTAGCTGAAGTTTGGATTCATATGCTTGATGGTTGTGAAAGGGCTGTGGGACAATGCTCAGAACAAGAGAGGAATGCCTAG 4350 0.3926 MQREYFVKYQGLAHAHNRWITESIMLLEAPKLLAKFKSKLQVTRWKRYWSIPHRLLLKREIVHFDGHGDNDSVCCYEWLVKWTGLGYDNATWELQDASFLTSAKGRKLIHDYESRRKRVDKLSKSHFEDNEERKTFVAELLVLPFGYSQGLYNQYLSYVNKLRMSWHKGQNALIVDDQIDQERIIKVILFVLSLNCNSKRPFLIISTSTALSVWETEFLHLAPSANLVVYKGNRDVRSGIRALEFFNEENGILFQILLSSSDIVVKDLHELRCIPWEAIIIDECQQSRISGHLDSIKILKTEMKLLLVSGQIKEDRSDYIKLLSFLKSAHHGSSITPIETSFSASISNLKSQLEKYVVFKCKSGSTRFVEYWVPACLSHLQLEQYCSILLSNLMLLCSGQKSDSVDALHELIISTRKCCDHPYLLEPALHNSVVQGVPVEEHLDIGIKASGKLLLLEKILLEARRLGLRVLILFQSTSGSGSIGDILDDVLCQRFGKDCYVRYGRAYTPKTKEAALDTFNDRDSGKFVFLMENRACLSSVKLSSVDTVILFDSDFDPQNDLRGLQRMSISSQLKQLTVFRLYSYYTVEEKILMLAKEGMSLDSNVRLISQSISHTLLKWGTSHLFNKLDDLHASVTSVSTPDIADQSLLHDVLCELSSQLVCGADDIDCHEWSFISTIQQNGGDYARNILLLGERIMKGLGSEPRAFSWSDLEGRYPQWKFLSVSSQRMRSRAKHSDYILNESECEDHTIIGKRTSSNASKKRKVSRDNVDHNLKKRTKDKVDPNRRKASKDVVETEGRELSNHAIDPKTRKVFNDIVDSRGRKMSKNIQPRSRSKKNSSVANRASKSNGSSNGLPSVLDSTGHPLANATTGGTATNMQLSEKRKLHDGPNSNKFLPKSDVSGLCDILHFPKNVKVVALRILEDIFKHYNVNCQEVSTVQAFEISVCWLAASLLKHEIDRKDSLTLAKLCLNFNCNEEEATDVYSELWKHVKKFSNYIQNGLCAEKYNTNGASETTMPELNNLTEEKQNDFLDTCVTKLVKSVNNEHDLTMKSHTTGVSCDQTFTLGICSFPNTPASFPVEAISVSMEFGSEDDIMESTPLIAAEDSALEHGGNDVNPLTDYLEKQSPIRSTDITQSDGKVCEDPQVLMNELVAIENAMNMSTHSLQLDSVEANAVTSIGSAVPEARLWGSVMSPVCNESIGLKFAETTLYTQPSDANLWPLPQIATSDIPSIPEHNSASTVTPLDDIFYHNREDHCYVHEAEVILETPNDLVEPVNSSFGSPVILQPFTSVAMNENMTHVPDSFTIPGYMNSDYFQHHHVASEISHLAYLDSLLDEMERIENTNEEAFIDPLLIEMERIEKDNEEAFKIHEQKISLLRSEFEKEVEKLSEKYRILLQNVDTEGALKKMELETQCKLVLSSEVLAEVWIHMLDGCERAVGQCSEQERNA* 1450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g02586 1449 MobiDBLite consensus disorder prediction 832 877 - -
Phac1g02586 1449 MobiDBLite consensus disorder prediction 751 877 - -
Phac1g02586 1449 Gene3D - 368 602 IPR027417 -
Phac1g02586 1449 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 163 330 IPR014001 -
Phac1g02586 1449 PANTHER CHROMODOMAIN-HELICASE-DNA-BINDING PROTEIN 3-RELATED-RELATED 3 980 - -
Phac1g02586 1449 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 369 605 IPR027417 -
Phac1g02586 1449 MobiDBLite consensus disorder prediction 761 826 - -
Phac1g02586 1449 Gene3D - 45 115 - -
Phac1g02586 1449 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 455 620 IPR001650 -
Phac1g02586 1449 SUPERFAMILY Chromo domain-like 52 115 IPR016197 -
Phac1g02586 1449 SUPERFAMILY Chromo domain-like 3 42 IPR016197 -
Phac1g02586 1449 Gene3D - 1 44 - -
Phac1g02586 1449 Gene3D - 151 367 IPR038718 -
Phac1g02586 1449 Pfam SNF2-related domain 152 424 IPR000330 GO:0005524|GO:0140658
Phac1g02586 1449 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 199 330 IPR027417 -
Phac1g02586 1449 Coils Coil 1379 1399 - -
Phac1g02586 1449 Gene3D - 1349 1430 - -
Phac1g02586 1449 Coils Coil 1331 1351 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g02586 Phac-Chr1 35237431 35260399 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SNF2 Phac1g02586 SNF2_N 2.4e-08 CL0023
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g02586 - K11643 gmx:100813574 2050.02