Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g02579 ATGGCCAAGGACATCCAAACTGAGTCCGAGGTACCAACTGGGTTGACCCACAAGGACTACTACGACCCACCCCCAGCCCCATTATACGACGCCGCCGAGCTCCGCAAGTGGTCCTTTTATAGGGCCCTCATCGCCGAGTTCGTCGCCACCCTCCTCTTCCTCTACGTCACCATCCTCACTGTCATCGGCTACAACCACCAGATCAATGCCGGCGACTCCTGCGAAGGCGTTGGCATCCTCGGCATCGCCTGGGCCTTCGGCGGCATGATTTTCGTCCTCGTCTACTGCACCGCGGGCATTTCTGGGGGTCACATAAACCCCGCCGTCACGTTCGGGTTGTTTCTTGCTAGAAAGGTGTCGCTAGTGAGAGCAATTGCGTACATGGTGGCTCAGTGCTTGGGAGCTATATCTGGCGTGGGGCTGGTAAAGGCGTTTCAGAAGAGCTACTACAACAGGTACAACGGTGGCGTGAACTTGCTCTCTGATGGGTACAGCAAAGGCGCTGGCTTGGGCGCAGAGATTATTGGCACCTTTGTTCTTGTCTACACCGTCTTCTCCGCCACCGATCCCAAGAGAAAAGCCAGAGATTCCCATGTTCCCGTTTTGGCACCACTTCCAATTGGGTTCGCAGTGTTCATGGTTCACTTAGCCACCATCCCTGTCACCGGCACTGGCATCAACCCCGCCAGAAGCCTCGGCCCTGCTGTCATATTTAACAACGAGAAGGCATGGGATGACCAGTGGATGTTCTGGGTTGGACCCTTCGTGGGTGCAGGCATCGCTGCAGTCTACCACCAGTACGTATTGAGGGCACAAGCGGCAAAGGCTCTCGGGTCATTCAGGAGCTCTTCAAACCTGTAA 861 0.5598 MAKDIQTESEVPTGLTHKDYYDPPPAPLYDAAELRKWSFYRALIAEFVATLLFLYVTILTVIGYNHQINAGDSCEGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAIAYMVAQCLGAISGVGLVKAFQKSYYNRYNGGVNLLSDGYSKGAGLGAEIIGTFVLVYTVFSATDPKRKARDSHVPVLAPLPIGFAVFMVHLATIPVTGTGINPARSLGPAVIFNNEKAWDDQWMFWVGPFVGAGIAAVYHQYVLRAQAAKALGSFRSSSNL* 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g02579 286 Gene3D Glycerol uptake facilitator protein. 26 286 IPR023271 -
Phac1g02579 286 Pfam Major intrinsic protein 33 265 IPR000425 GO:0015267|GO:0016020|GO:0055085
Phac1g02579 286 CDD MIP 41 268 IPR000425 GO:0015267|GO:0016020|GO:0055085
Phac1g02579 286 PANTHER AQUAPORIN OR AQUAGLYCEROPORIN RELATED 13 280 IPR034294 -
Phac1g02579 286 NCBIfam MIP family channel protein 45 264 IPR000425 GO:0015267|GO:0016020|GO:0055085
Phac1g02579 286 ProSitePatterns MIP family signature. 104 112 IPR022357 -
Phac1g02579 286 PRINTS Major intrinsic protein family signature 248 268 IPR000425 GO:0015267|GO:0016020|GO:0055085
Phac1g02579 286 PRINTS Major intrinsic protein family signature 123 142 IPR000425 GO:0015267|GO:0016020|GO:0055085
Phac1g02579 286 PRINTS Major intrinsic protein family signature 208 230 IPR000425 GO:0015267|GO:0016020|GO:0055085
Phac1g02579 286 PRINTS Major intrinsic protein family signature 41 60 IPR000425 GO:0015267|GO:0016020|GO:0055085
Phac1g02579 286 PRINTS Major intrinsic protein family signature 86 110 IPR000425 GO:0015267|GO:0016020|GO:0055085
Phac1g02579 286 PRINTS Major intrinsic protein family signature 172 190 IPR000425 GO:0015267|GO:0016020|GO:0055085
Phac1g02579 286 FunFam Probable aquaporin PIP1-2 26 284 - -
Phac1g02579 286 SUPERFAMILY Aquaporin-like 33 270 IPR023271 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g02579 Phac-Chr1 35117483 35120307 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac1g02579 1 286 Major Intrinsic Protein MIP AT2G37170 76.125 3.42e-163 454
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g02579 K09872 - gmx:100785783 498.434