Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g02577 ATGAAGATTCCTTGTTCTTTTTGTACTTGTTTCTCAGCATCGGTCAAAGAACAACACACTAAGCACGAAGAGCCAGGTGAAGATAATGATGGAAACTTTCGCATATTCACTTATAGAGAATTGAATTCCGCCACGCGGGGTTTTCATCCCTCGGAAAAGATTGGAGAAGGAGGCTTTGGCTCCGTCTACAAGGGGCAGCTTCGGGATGGAAGTTTGGTGGCTGTTAAAGTGCTTTTGATTGAGCTAGATTCCGTAAGTGGAGAGAGGGGGTTTGTGGCAGAATTGAATACACTAGCAAATATCAAGCACCAAAATCTAGTTATTCTTCGAGGGTGCTGTGTTGAAGGAGCCCACAGATACATAGTCTACGATTATATGGAAAACAACAGCCTCCGTCACACTTTCTTAGTTTCTGAGCAAAAAAGAATGACATTCAGCTGGGAGGCTCGGATGGGAGTATCAATAGGTGTAGCCAGAGCGCTTGCCTTTCTCCATGAGGAACTTCAACCCCATATTGTGCACAGAGATATCAAATCCAGCAATGTTCTTCTTGATGGAAATTTCACACCAAAAGTCTCAGATTTTGGCCTGGCCAAGTTACTAAGAGAAGAAAAATCCTACATCAGTACCCAAGTTGCAGGCACATTAGGTTATATTGCTCCGGACTATGCCAGTTCTGGCCACCTGACACGAAAATCAGATGTTTATAGTTTTGGAGTACTACTTCTAGAAATTGTCAGTGGCCAAAGAGCAGTAGATGAACATCAAGTTGTGGATCGTTTCTTAGTAGAGAAGTGTTGGGCAGCGTACGAGGGTAATGATCTTTTGAGAATGGTGGATCCAATGCTGAACAAGAACTATCCAATGGAAGAAGCTAAACGGTTCCTAATGGTGGGACTTTGTTGCGTGCAAGAAACGGCCAGGATCAGGCCACGAATGTCAGAGGTTGTAAACATGTTGAGCAACAACACTGAGATGGGAGAGTTTCATATTTCACGACCAGGATTTGTTAATGATATGAGGAACGCCAAAATGAGGAGGCAACTAAATTCATCAGAGGAATCAAGTGCTGGGGCAGCAACCTTTGCAGATTCCTCCGGATGGAGTACCACCAATCTTGCTCGTTAG 1128 0.4397 MKIPCSFCTCFSASVKEQHTKHEEPGEDNDGNFRIFTYRELNSATRGFHPSEKIGEGGFGSVYKGQLRDGSLVAVKVLLIELDSVSGERGFVAELNTLANIKHQNLVILRGCCVEGAHRYIVYDYMENNSLRHTFLVSEQKRMTFSWEARMGVSIGVARALAFLHEELQPHIVHRDIKSSNVLLDGNFTPKVSDFGLAKLLREEKSYISTQVAGTLGYIAPDYASSGHLTRKSDVYSFGVLLLEIVSGQRAVDEHQVVDRFLVEKCWAAYEGNDLLRMVDPMLNKNYPMEEAKRFLMVGLCCVQETARIRPRMSEVVNMLSNNTEMGEFHISRPGFVNDMRNAKMRRQLNSSEESSAGAATFADSSGWSTTNLAR* 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g02577 375 ProSitePatterns Serine/Threonine protein kinases active-site signature. 172 184 IPR008271 GO:0004672|GO:0006468
Phac1g02577 375 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 126 331 - -
Phac1g02577 375 Gene3D Phosphorylase Kinase; domain 1 17 125 - -
Phac1g02577 375 SMART serkin_6 48 296 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac1g02577 375 Gene3D Transferase(Phosphotransferase) domain 1 126 332 - -
Phac1g02577 375 ProSiteProfiles Protein kinase domain profile. 48 326 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac1g02577 375 FunFam Serine/threonine-protein kinase receptor 17 125 - -
Phac1g02577 375 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 32 370 - -
Phac1g02577 375 MobiDBLite consensus disorder prediction 349 375 - -
Phac1g02577 375 ProSitePatterns Protein kinases ATP-binding region signature. 54 76 IPR017441 GO:0005524
Phac1g02577 375 SUPERFAMILY Protein kinase-like (PK-like) 30 335 IPR011009 -
Phac1g02577 375 CDD STKc_IRAK 54 320 - -
Phac1g02577 375 Pfam Protein kinase domain 49 310 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g02577 Phac-Chr1 35088463 35090802 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac1g02577 36 339 Receptor kinase-like Gene Family AT1G56120 48.525 3.74e-90 288
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Phac1g02577 Pkinase 1.8e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g02577 - - gmx:100790388 583.948