Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g02572 ATGTTCAATGCTTTCGGTTATTCGTTGTTGACAATGGATTCGGTGGCGTACAGGGGATTGCTCTACACATTCTTCATACTCAATTTCGTTTTGGTCTGCCAACTCATTCTCCTTCACCCTCTCGTTTCTGCTTCCGATGGAAATCCTGAAAACGCTGCTGAGTTGTTTGAGCGGGCATCGCAAAGCGTAAAAGTGAAACACTATACTGAGGCACTTGATGATCTAAATGCTGCAATTGAAGCAGACCCAACCCTTTCAAAAGCATACCTTTTCAGAGCCTCAGTTCTTCGTCAGATATGCAGATATGAGCAATCCGAGAGGAGCTACAAACAGTTTCTGGAGTTAAAGCCTGGAGATTCAGTTGCAGAAAAGGAGCTCTCTCAACTATTGCAGGCTCAAAGTGCCCTAGAAACAGCTCAGTCCCTCCATGATTTGGGCAACTTCTCAAAATCTTTGGAATTTATTGATAAAGTTGTTCTTGTTTTCTCTCCAGATTGCACTAAGGCCAAGCTTCTTAAAGTGAAGGTGTTAATAGCTGATAAAGAATATGAGGGTGCCATTGCTGAGTCAGGGTTTCTTCTCAAGGAAGATGAAAATAATTTAGAGGCATTGTTGTTACGTGGTCGAGCATATTACTATCTAGCTGATCATGATGTTGCCACGAGGCATTTTCAGAAAGGTCTTCGCTCAGATCCAGAGCACAGTGAACTGAAAAAAGCATATTTTGGATTGAAAAATCTACTAAAGAAGAGTAAAAGTGCTGAAGATAATGCGAGTAAGGGTAAACTACGTGTGGCAGTGGAAGAATTCAAAGCTGCTCTTGCTGTAGACCCTAACCATCTTGCGCACAATGTACATCTTCATCTTGGCTTATGTAAAGTGCTAGTCAAGCTTGGCAGAGGAAAAGACGCCTTGGAAAGTTGTAGTGAAGCTCTTAAGATCAATGAAGAACTTGTTGAAGCTCTTGTTCAGAGAGGAGAAGCTAAACTCTTAATAGAGGATTGGGAGGGAGCTGTGGATGATATGAAATCAGCTGCTCAAAAATCTCCTCAGGATATGAGTATCCGTGAAGCAGTAATGAGGGCGGAGAAAGCTTTAAAGATAAGCAAACGTAAGGATCACTACAAGACTTTGGGAATTTCAAAAACTGCTTCTGCTGCTGATATAAAACGTGCCTACAAGAAACTAGCCTTACAATGGCACCCAGATAAGAATGTCGACAAAAGAGAAGAAGCAGAGGCTAAATTCCGAGAAATTGCTGCTGCATATGAGGTTCTTAGCGATGAAGACAAACGCGTAAGATATGACAGGGGGGAGGACCTTGACGAGATGGGAATGGGCGGCGGTGGTGGCGGCGGTTTCAACCCTTTTGGTGGTGGAGGCCAGCAGTTTACCTTTAATTTTGAGGGTGGCTTCCCTGGTGGTGGATTTGGAGGGGGCTTTCCTGGAGGGTTTGAATTTCACTTCTGA 1470 0.4347 MFNAFGYSLLTMDSVAYRGLLYTFFILNFVLVCQLILLHPLVSASDGNPENAAELFERASQSVKVKHYTEALDDLNAAIEADPTLSKAYLFRASVLRQICRYEQSERSYKQFLELKPGDSVAEKELSQLLQAQSALETAQSLHDLGNFSKSLEFIDKVVLVFSPDCTKAKLLKVKVLIADKEYEGAIAESGFLLKEDENNLEALLLRGRAYYYLADHDVATRHFQKGLRSDPEHSELKKAYFGLKNLLKKSKSAEDNASKGKLRVAVEEFKAALAVDPNHLAHNVHLHLGLCKVLVKLGRGKDALESCSEALKINEELVEALVQRGEAKLLIEDWEGAVDDMKSAAQKSPQDMSIREAVMRAEKALKISKRKDHYKTLGISKTASAADIKRAYKKLALQWHPDKNVDKREEAEAKFREIAAAYEVLSDEDKRVRYDRGEDLDEMGMGGGGGGGFNPFGGGGQQFTFNFEGGFPGGGFGGGFPGGFEFHF* 490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g02572 489 ProSiteProfiles dnaJ domain profile. 373 439 IPR001623 -
Phac1g02572 489 Gene3D Tetratricopeptide repeat domain 42 370 IPR011990 GO:0005515
Phac1g02572 489 ProSiteProfiles TPR repeat profile. 86 119 IPR019734 GO:0005515
Phac1g02572 489 ProSiteProfiles TPR repeat profile. 201 234 IPR019734 GO:0005515
Phac1g02572 489 SUPERFAMILY Chaperone J-domain 367 477 IPR036869 -
Phac1g02572 489 Pfam Tetratricopeptide repeat 261 317 - -
Phac1g02572 489 CDD DnaJ 373 428 IPR001623 -
Phac1g02572 489 Gene3D DnaJ domain 371 480 IPR036869 -
Phac1g02572 489 FunFam DnaJ subfamily C member 7 371 480 - -
Phac1g02572 489 PRINTS DnaJ domain signature 393 408 IPR001623 -
Phac1g02572 489 PRINTS DnaJ domain signature 375 393 IPR001623 -
Phac1g02572 489 PRINTS DnaJ domain signature 431 450 IPR001623 -
Phac1g02572 489 PRINTS DnaJ domain signature 411 431 IPR001623 -
Phac1g02572 489 SMART dnaj_3 372 431 IPR001623 -
Phac1g02572 489 PANTHER DNAJ PROTEIN P58IPK HOMOLOG 23 489 IPR044620 -
Phac1g02572 489 FunFam DnaJ domain containing protein 39 370 - -
Phac1g02572 489 Pfam DnaJ domain 373 436 IPR001623 -
Phac1g02572 489 Coils Coil 409 429 - -
Phac1g02572 489 ProSitePatterns Nt-dnaJ domain signature. 416 435 IPR018253 -
Phac1g02572 489 SUPERFAMILY TPR-like 46 368 IPR011990 GO:0005515
Phac1g02572 489 SMART tpr_5 86 119 IPR019734 GO:0005515
Phac1g02572 489 SMART tpr_5 201 234 IPR019734 GO:0005515
Phac1g02572 489 SMART tpr_5 132 165 IPR019734 GO:0005515
Phac1g02572 489 SMART tpr_5 285 318 IPR019734 GO:0005515
Phac1g02572 489 SMART tpr_5 52 85 IPR019734 GO:0005515
Phac1g02572 489 SMART tpr_5 319 352 IPR019734 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g02572 Phac-Chr1 35029242 35033678 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac1g02572 369 436 C2H2 Transcription Factor Family AT1G74250 47.222 5.35e-11 63.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g02572 K09523 - gmx:100804685 773.467
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac1g02572 1 35029242 35033678 Phac1g02572 1 35029242 35033678 ECH