Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g02568 ATGTTCATATTCATGGACAAAGATGCTAATTTAGAAATCCAACTCCCTCCTGGATTTAGATTCCACCCTTCTGACGAAGAGCTAATTGTTCACTATCTGAGAAACAAAGTGACATCATCACCCCTTCCCGGCTCATTCATAGCAGAAATAGATCTTTACAAGTATAATCCATGGGAGCTCCGAAGTAAAGCGTTGTTTGGGGAGGATGAATGGTATTTCTTTACTCCCAGGGACAGGAAGTATCCCAATGGAGTGAGGCCTAATAGAGCAGCTGCTTCTGGTTATTGGAAGGCTACTGGCACTGACAAACCCATTTTTACTTCATGTGGGATGAAGAATATTGGAGTGAAGAAAGCCCTAGTGTTCTACATGGGTCGCGCACCAAAAGGATCTAAAACTGATTGGATCATGCACGAGTACAGGTTGCAGAATTCCATGATCTCCATTCCACAGCAAAGAGGGTCTATGAGACTGGATGAGTGGGTGCTGTGCCGGGTCCGACAGAAAACTGGCAGCACAAGAAGCATTTGGGAAGACTCAAATGAATCTATTCATGAACCAACACGCCACTTTCCAGAAATGAATGAGAACTCAAATCCTGAACCAGCCAAAAATTGTATTGGCATAGCCTCAGGCTCAGGCTTTGGTTGTAATAATGATGTAAAAGCATATGCTTCATGGCATGATGACAACTCGAATATAGTAATTGGAGCACAGTTTATGGCACCTGTAACTGAGGGCTTGTTTAATCCACTGAAGAGAAAAAACATTGAAGAGAACGATCAGTTGGACTTTCTCAATAAAAAAATAAGCGAAGAAGTTGATGTTGGGAAACAAAGACTTGAGAAAGATGTAAACAAATGCTACAATTTCAATAACTTTGACCACTGGACTTCCATCATACAACCCCAAGTTTAA 918 0.4161 MFIFMDKDANLEIQLPPGFRFHPSDEELIVHYLRNKVTSSPLPGSFIAEIDLYKYNPWELRSKALFGEDEWYFFTPRDRKYPNGVRPNRAAASGYWKATGTDKPIFTSCGMKNIGVKKALVFYMGRAPKGSKTDWIMHEYRLQNSMISIPQQRGSMRLDEWVLCRVRQKTGSTRSIWEDSNESIHEPTRHFPEMNENSNPEPAKNCIGIASGSGFGCNNDVKAYASWHDDNSNIVIGAQFMAPVTEGLFNPLKRKNIEENDQLDFLNKKISEEVDVGKQRLEKDVNKCYNFNNFDHWTSIIQPQV* 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g02568 305 FunFam NAC domain-containing protein 72-like 24 174 - -
Phac1g02568 305 ProSiteProfiles NAC domain profile. 15 169 IPR003441 GO:0003677|GO:0006355
Phac1g02568 305 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 14 226 - -
Phac1g02568 305 MobiDBLite consensus disorder prediction 175 199 - -
Phac1g02568 305 SUPERFAMILY NAC domain 12 169 IPR036093 GO:0003677|GO:0006355
Phac1g02568 305 Gene3D NAC domain 24 173 IPR036093 GO:0003677|GO:0006355
Phac1g02568 305 Pfam No apical meristem (NAM) protein 16 142 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g02568 Phac-Chr1 34959512 34961079 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac1g02568 14 178 NAC Transcription Factor Family AT1G61110 67.052 3.43e-80 244
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Phac1g02568 NAM 5.5e-38 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g02568 - - gmx:100788799 502.671