Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g02565 ATGGGTCATAGGCACGTATATAACACATCTCCATTGTTCGAGGGTGAGCCTGACCAGAACTGGAATCATATGCCCATTGATCAACACTATGTGCACCTTGGTAGAACTAGCACTTCAGAGAATGGTTCTTTTATTTATCCTGCGGACAATATGTCTATAGATAGCATTTCTTTCCCCTCTCATTGGAACTCTTCCACAAGGTCAAATGGATATGCATCCTCAGGTCTCAACCTTGATGTACCTCCTCATCAGCCAGATGCATCAGGCACTTCTAATGATCATTTTGTGCATTCATCTAGTGCTGGAGCGTTCTTTACTGTGTCCGATAATCACGTACTCCAACCTTCCAATTATGACAGACAGACATTTCATGTTGATAGTGGTTTTGTTGATCTTACAATGGGAAGTGGTCAAGGGCCTCACAAGCGTAAGAGCCCTGGAATTTCTCCAGTCTATGAGAGAGGAAGTACAAGTAGATACTTCAATGCTGGAAGTTCAGCTGATGTTCCTATACCTTCGGAATTATGGCAGGAGAAGCCAAATATTGATTCTCAATATGTTCCCTGGGATCATTTTACTATGACACCCACATTCAGAGGTACTGGCCTTTCAATAAAGGGTGAGGGTTCTTTGCGGAATGTGAGGAGCCGTCCTGCACTTGATTTGGATTCCAATCCATCTATAACCCATTTATCAACTAATCATTCACACAATTCGTACCCTACTCTCCCACCAGTAGACCATTCTAGTTTGGTGGATGTTTCTGGTCAGACTTCTGCTACATTGACAAGGGATTGGAGCCAAATGAACATATCTCCAGCTAATGGAAGGGTTTTATTACCAGATACAAGTGCTTTTGGTCTTGACACAAGTCATTTCCTTGTTGGAAGTGGTGCTACTGTTAGCAATGCTTCTGTAGATGTTGGGTGCTTCCATCATGATTTTGGTACAAGCAGAAATCCTGCTCCTCCTCTAAGTTTTCAAAATAATCAAACTCAGACTGCTAGGGGAATTCAAAGCAACTATTCTCAGAGATCCACTCCCACAATTAGGGCTTCTTCAAGCTTGCGCATGGGACATGTGACATCTTTGGATGAAGGATTGCCTATGGTAGCTGAAAGTTACTCTTCTAGACATCCAAGGTCATTGAGCACCCATGGCTGGCGGAACGGTGATAGAAATGGGAGATCAAGAATTTCAAGTCAAAGATATCGTTCGTTGACGGAGGAGAGTGGTCTCGCTGAACGATTTGCCTCGGAGGGTATCTTGGTTGTTGAGCGTGCATCGGTGTATGCTTCCAGGAATATGCTTGATCAGCACCGAGAAATGAGAATGGACATAGATAACATGAGTTACGAGGACCTACTTGCACTAGGTGAAAGGATTGGCAATGTGAACACAGGGGTCTCTGAGGATTTGTTTTCCAAATGTTTGACGGAAACAATATATTGTTCATCTGAGCAAAGTCAAGACGAAGGAAACTGTGTAATATGTCTGATTACAAGAACATGGATGATGTTGGAACACTTAAAACTTGTGGACATGACTACCATGTGA 1557 0.4297 MGHRHVYNTSPLFEGEPDQNWNHMPIDQHYVHLGRTSTSENGSFIYPADNMSIDSISFPSHWNSSTRSNGYASSGLNLDVPPHQPDASGTSNDHFVHSSSAGAFFTVSDNHVLQPSNYDRQTFHVDSGFVDLTMGSGQGPHKRKSPGISPVYERGSTSRYFNAGSSADVPIPSELWQEKPNIDSQYVPWDHFTMTPTFRGTGLSIKGEGSLRNVRSRPALDLDSNPSITHLSTNHSHNSYPTLPPVDHSSLVDVSGQTSATLTRDWSQMNISPANGRVLLPDTSAFGLDTSHFLVGSGATVSNASVDVGCFHHDFGTSRNPAPPLSFQNNQTQTARGIQSNYSQRSTPTIRASSSLRMGHVTSLDEGLPMVAESYSSRHPRSLSTHGWRNGDRNGRSRISSQRYRSLTEESGLAERFASEGILVVERASVYASRNMLDQHREMRMDIDNMSYEDLLALGERIGNVNTGVSEDLFSKCLTETIYCSSEQSQDEGNCVICLITRTWMMLEHLKLVDMTTM* 519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g02565 518 MobiDBLite consensus disorder prediction 375 403 - -
Phac1g02565 518 MobiDBLite consensus disorder prediction 218 244 - -
Phac1g02565 518 MobiDBLite consensus disorder prediction 220 244 - -
Phac1g02565 518 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RNF165 104 499 IPR045191 GO:0061630
Phac1g02565 518 MobiDBLite consensus disorder prediction 332 353 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g02565 Phac-Chr1 34936152 34945161 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac1g02565 1 498 C3H Transcription Factor Family AT2G37150 38.735 1.18e-88 281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g02565 - - gmx:100803627 870.537