Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g02545 ATGGGGAGGAAGGGAAATTGGTTTTCAAGCGTGAAGAAAGCTCTCAGCCCCGACTCAAAGGAGAAGAAAGATCAGAAATCAAGTAAATCTAAGAAGAAATGGTTTGGGAAGCAAAAATTGCAAACTTCAGTCTCATACTCAGAAGCTGATAAGCTGCCGCCGCCACCACCACCACCTGTTCCTCTGCCAGAAGAGATTAAATTAACTGACATTGAAAATGAAATCAGTCATGATCATGATCATGTTGTTGAAGTTGTAACTGCCGTTGAAGCCGAGGACCCTGTTCCTCCTGTTCAGATAGAAACGGTTAGGGTTGAAGCTGCCCGGATTCCTCGTTTTTCCGGCAAACCAAATGATGAAGTGGCAGCAATCAAAATTCAAACAGCTTTTCGGGGATACTTGGCAAGAAGAGCATTGCGGGCTTTAAGGGGGTTGGTCAGGTTGAAATTATTGATGGAAGGGTCGGTTGTAAAACGCCAAGCCACCAGTACCCTTCGATCTATGCAGACATTGTCTCGCTTGCAGTCTCAGATTCGTTCCAGGAGGATCAGAATGTTGGAGGAGAATCAGGCTCTGCAGAGACAGCTGTTACAGAAGCATGCGAGAGAGCTTGAGAATTTGCGGATGGGAGAGGAATGGGATGACAGCCTACAATCAAAAGAACAAATCGAAGCTAAGTTACTAAGCAAGTATGAAGCTGCTATGAGGAGAGAAAGAGCACTGGCTTATGCATTTACTCATCAGCAAAACTGGAAGAACTCATCTAGATCTTTAAATCCAATGTTCATGGATCCAACAAATCCTGCCTGGGGTTGGAGCTGGTTGGAACGATGGATGGCAGCCCGGCCATTGGAGAACCGTAGCCAGATGGATAAAGAGATGAATGACCATGCATCCCTGAAAAGCTCAAGCCGCAGCATTACTGGTGGAGAAATCAGCAAGTCATTTGCTCGTTTCCAGCTCAATTCTGAAAAGCAATCTCCAACAGCCAGCCAAAATCCTGGCTCACCTAGCTTTCACTCCACTCCTTCCAAACGAGTTTCGGCATCTGCTAAGAAATCAAAGAAGGCAAGTCCAAGGGGCAGCTGGATTACAGACGAGGACTCTAAAAGCTTGGTCAGTGTACAGTCAGATCGGTTCCGGAGGCACTCAATCGCAGGTTCATCTGTGAGAGACGACGAGAGCCTTGCTAGCTCTCCAGCAATTCCAAGCTACATGGTGCCAACTCAATCTGCAAAAGCCAAGTCCAGGACACAAAGTCCATTAGCCCCAGAAAATGGAAAAACTGAGAAAGGATCCTTTGGGACTGCAAAGAAGCGGCTATCTTTCCCAGCTTCACCTTCCAGGCCAAGGCGCCATTCAGGTCCACCAAAGGTAGAAATCAGCTTAAATGCCGAGTTATCTGTGGACAAGGTTGTGGACAGTTGA 1428 0.4685 MGRKGNWFSSVKKALSPDSKEKKDQKSSKSKKKWFGKQKLQTSVSYSEADKLPPPPPPPVPLPEEIKLTDIENEISHDHDHVVEVVTAVEAEDPVPPVQIETVRVEAARIPRFSGKPNDEVAAIKIQTAFRGYLARRALRALRGLVRLKLLMEGSVVKRQATSTLRSMQTLSRLQSQIRSRRIRMLEENQALQRQLLQKHARELENLRMGEEWDDSLQSKEQIEAKLLSKYEAAMRRERALAYAFTHQQNWKNSSRSLNPMFMDPTNPAWGWSWLERWMAARPLENRSQMDKEMNDHASLKSSSRSITGGEISKSFARFQLNSEKQSPTASQNPGSPSFHSTPSKRVSASAKKSKKASPRGSWITDEDSKSLVSVQSDRFRRHSIAGSSVRDDESLASSPAIPSYMVPTQSAKAKSRTQSPLAPENGKTEKGSFGTAKKRLSFPASPSRPRRHSGPPKVEISLNAELSVDKVVDS* 476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g02545 475 MobiDBLite consensus disorder prediction 322 462 - -
Phac1g02545 475 MobiDBLite consensus disorder prediction 402 426 - -
Phac1g02545 475 Gene3D - 101 145 - -
Phac1g02545 475 PANTHER IQ-DOMAIN 5-RELATED 1 456 - -
Phac1g02545 475 SMART iq_5 118 140 IPR000048 GO:0005515
Phac1g02545 475 Pfam IQ calmodulin-binding motif 122 140 IPR000048 GO:0005515
Phac1g02545 475 MobiDBLite consensus disorder prediction 1 60 - -
Phac1g02545 475 MobiDBLite consensus disorder prediction 322 348 - -
Phac1g02545 475 ProSiteProfiles IQ motif profile. 119 147 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g02545 Phac-Chr1 34850378 34854970 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac1g02545 1 460 IQD Protein Family AT5G03040 54.947 1.54e-156 451
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g02545 - - gmx:100800080 706.442
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac1g02545 1 34850378 34854970 Phac1g02545 1 34850378 34854970 ECH