Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g02536 ATGTTGACTGGTCCCTTACCTGATTTTACTGGGTGCATGGACTTAAAGATCATTCATCTAGAAAACAATCAATTGACAGGTGTGCTCCCAACTTCTTTAGTGAATCTTCCAAGCCTGAGGGAACTGTTTGTGCAAAATAACATGTTATCTGGAACGATACCATCAGATCTTCTTAGTAAGGATTTGGTTTTGAACTATTCTGGAAACCTCAATCTTCACAAAGAAAGTAAAATAAAGGGGCACATGTACGTTATTATTGGTTCATCAGTTGGGGCTTCTGTTCTACTTTTGGCTACTGTTATATCTTGCATGTTTATGCGTAAGGGCAAGAAAAAATATTATCAGAAAGACCGAGTTGATTCTCTCCCTGCTCAAAGGCTGGCTTCTTGGAAGAACGATGATCCTGCAGAAGCTGCTCACTGCTTCAGTTTTTCTGAAATTGAAAATGCTACAAATAACTTTGAGAAAAAAATTGGTGCTGGTGGCTTTGGAGTTGTCTACTATGGGAAGCTAAAAGATGGAAAAGAGATAGCAGTTAAAGTTTTAACCAGTAATTCCTACCAAGGCAAGCGAGAGTTCTCCAATGAGGTAACTCTTCTTTCAAGAATACATCATAGAAATTTGGTACAGCTGCTTGGTTATTGTCGAGATGAAGAGAATAGTATGCTTGTCTATGAGTTCATGCATAATGGCACTCTCAAGGAACATCTTTATGGCCCATTAGCGAATGGAAGGAGTATCAATTGGATTAAGCGTCTTGAGATTGCTGAAGATGCTGCCAAAGGGATTGAATATCTTCATACGGGTTGCGTTCCTGTCGTTATCCATAGAGACTTAAAAAGCAGCAATATTCTTCTCGACAAGCACATGAGAGCCAAGGTTTCTGATTTCGGTCTTTCAAAACTTGCTGTTGATGGAGTCTCCCATGTTTCAAGCATAGTGCGGGGAACAGTAGGATATCTGGATCCTGAGTACTATATTTCCCAACAGCTGACAGACAAGAGTGATGTTTATAGTTTTGGTGTAATTCTCCTTGAACTAATGTCTGGTCAAGAAGCAATATCAAATGAAAGCTTTGGTGTAAATTGCCGAAACATAGTCCAATGGGCAAAATTACACATTGAGAGTGGAGATATACAAGGTATAATCGATCCGTTGTTGCACAATGAATATGACCTACAATCAATGTGGAAAATAGCAGAGAAAGCATTGATGTGTGTTCAGCCCCATGGACATATGCGGCCATCTATTTCAGAAGTTCTAAAGGAGATCCAAGATGCCATATCTATTGAAAGACAGGCAGAAGCATTAAGAGAAGGGAATTCAGATGATTTGTCAAAAAATTCTTTTCACTCTTCCTTGAACATGGGTTCAATTGATCTAGTTGGAACTGAAAGTTACCTGTCAATTGATGAATCAGTTGCACAGCCAACAGCAAGATAG 1443 0.3922 MLTGPLPDFTGCMDLKIIHLENNQLTGVLPTSLVNLPSLRELFVQNNMLSGTIPSDLLSKDLVLNYSGNLNLHKESKIKGHMYVIIGSSVGASVLLLATVISCMFMRKGKKKYYQKDRVDSLPAQRLASWKNDDPAEAAHCFSFSEIENATNNFEKKIGAGGFGVVYYGKLKDGKEIAVKVLTSNSYQGKREFSNEVTLLSRIHHRNLVQLLGYCRDEENSMLVYEFMHNGTLKEHLYGPLANGRSINWIKRLEIAEDAAKGIEYLHTGCVPVVIHRDLKSSNILLDKHMRAKVSDFGLSKLAVDGVSHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELMSGQEAISNESFGVNCRNIVQWAKLHIESGDIQGIIDPLLHNEYDLQSMWKIAEKALMCVQPHGHMRPSISEVLKEIQDAISIERQAEALREGNSDDLSKNSFHSSLNMGSIDLVGTESYLSIDESVAQPTAR* 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g02536 480 ProSitePatterns Serine/Threonine protein kinases active-site signature. 274 286 IPR008271 GO:0004672|GO:0006468
Phac1g02536 480 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 228 437 - -
Phac1g02536 480 ProSitePatterns Protein kinases ATP-binding region signature. 158 180 IPR017441 GO:0005524
Phac1g02536 480 ProSiteProfiles Protein kinase domain profile. 152 428 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac1g02536 480 Pfam Leucine rich repeat 9 49 IPR001611 GO:0005515
Phac1g02536 480 Gene3D Phosphorylase Kinase; domain 1 128 227 - -
Phac1g02536 480 PANTHER OS07G0107800 PROTEIN-RELATED 2 428 - -
Phac1g02536 480 Gene3D Transferase(Phosphotransferase) domain 1 228 450 - -
Phac1g02536 480 FunFam Leucine-rich repeat receptor-like protein kinase 130 227 - -
Phac1g02536 480 SUPERFAMILY L domain-like 3 69 - -
Phac1g02536 480 CDD STKc_IRAK 158 425 - -
Phac1g02536 480 Gene3D Ribonuclease Inhibitor 1 63 IPR032675 -
Phac1g02536 480 SUPERFAMILY Protein kinase-like (PK-like) 138 422 IPR011009 -
Phac1g02536 480 SMART serkin_6 152 428 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac1g02536 480 Pfam Protein tyrosine and serine/threonine kinase 154 354 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g02536 Phac-Chr1 34803613 34811208 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac1g02536 2 435 Receptor kinase-like Gene Family AT1G67720 50.340 8.08e-144 433
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Phac1g02536 PK_Tyr_Ser-Thr 2.8e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g02536 - - gmx:100784017 905.59