Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g02531 ATGCTGGATCTTAACCTCAACGCCGATTCCCCCTCCGACAACAACCACACGCCCCCGCTCTCCGTCGCTCAAATGGAGAGCTCCGGAAGCTTCAGTTCCTCCGTCGTCAATGCTGCCGACACCGATGACTCCTGCTCCTACGGCGACACCGTCGCCTACAACTTCGCCATCCTCAACAACAGCGCCTCCTTCTCCGCTGGAGAATCCTCCGTCCGCACCATCCAGCTCTTTCCGGCGACCGACTCCGGTGTCTCGCCGGCTTGGCTGGATGTCTCGTCGAAGGTGGATCAGCACGGTGTCGCGGCGGAGCAGATGATCACTCCGCGGCAGCCGCAGGTGAAGAAGAGCCGCCGCGGACCGAGGTCACGAAGCTCGCAGTATCGCGGCGTCACTTTCTATCGCAGAACAGGAAGATGGGAATCGCACATTTGGGATTGTGGCAAACAAGTGTACTTAGGTGAGGTCCCCATTAGAGAATTCGTTTTACATTATGCGCTTCACTTTCTTCAATATCGCTTTCTTTCTTTTGTAGGTGGATTTGACACGGCGCATGCTGCGGCAAGGGCGTATGATCGAGCTGCGATCAAGTTCCGTGGGGTTGATGCCGATATCAATTTCAACGTTAGCGATTACGATGAGGATATAAAGCAGATGAGTAATTTCACGAAGGAGGAGTTTGTGCATATTCTGCGTCGACAGAGCACTGGTTTTTCAAGGGGAAGCTCCAAATACAGGGGAGTTACTCTGCATAAGTGCGGGCGATGGGAAGCTCGTATGGGGCAGTTTCTGGGTAAAAAGTATATATATCTCGGGCTATTCGACAGCGAATTAGAGGCTGCAAGAGCGTATGATAGGGCTGCTATAAAATGCAATGGAAGGGAAGCAGTTACAAACTTCGAGCCCAGCATATACGAAGGGGAGGTGATTTCCCAATCTGATAATGAAGATGGCAAGCAAATTCTTGATCTTAACCTGGGCATAGCTCCCCCTTCTTACTCTGACAGTCAAATCAAGAACACACCCAGCAACGGGAGTGGTTTGAAAGCTCCACCCAGCTGGGATGATAGCCCTGTCAAAAAGAGATTTATGTTTGAGCACTCTGGATCGAGATCGTTGAATGTCCAGCCATCTCATGGCATCTCCAGAGTATCTGGGCATCATCCTTCCGCCTGGAATGATAGCAATTTCTTTCCCATCTACGAGGAAACAGCAATAGAGAAGAAGATGGAAGCTGGTCCCATGCCTAGTTGGGCATGGCAAGTCCAAGGTCCTTATGGCGGGGCAAGTCTTACTCCACCATTCTCTACTGCAGCATCATCAGGATTCCCTTCAACAATAATACCATCAGCTGCGGATACTCAAATTCATTTTCCAAACATGACATTCCTCCACTCACATTTTCCACCATCAATCACTAACTCAAGCACTATATCCCCTTTCTTCATCGGTAGCTGA 1455 0.5045 MLDLNLNADSPSDNNHTPPLSVAQMESSGSFSSSVVNAADTDDSCSYGDTVAYNFAILNNSASFSAGESSVRTIQLFPATDSGVSPAWLDVSSKVDQHGVAAEQMITPRQPQVKKSRRGPRSRSSQYRGVTFYRRTGRWESHIWDCGKQVYLGEVPIREFVLHYALHFLQYRFLSFVGGFDTAHAAARAYDRAAIKFRGVDADINFNVSDYDEDIKQMSNFTKEEFVHILRRQSTGFSRGSSKYRGVTLHKCGRWEARMGQFLGKKYIYLGLFDSELEAARAYDRAAIKCNGREAVTNFEPSIYEGEVISQSDNEDGKQILDLNLGIAPPSYSDSQIKNTPSNGSGLKAPPSWDDSPVKKRFMFEHSGSRSLNVQPSHGISRVSGHHPSAWNDSNFFPIYEETAIEKKMEAGPMPSWAWQVQGPYGGASLTPPFSTAASSGFPSTIIPSAADTQIHFPNMTFLHSHFPPSITNSSTISPFFIGS* 485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g02531 484 CDD AP2 242 302 IPR001471 GO:0003700|GO:0006355
Phac1g02531 484 MobiDBLite consensus disorder prediction 332 349 - -
Phac1g02531 484 SUPERFAMILY DNA-binding domain 242 302 IPR016177 GO:0003677
Phac1g02531 484 Gene3D AP2/ERF domain 242 301 IPR036955 GO:0003700|GO:0006355
Phac1g02531 484 Gene3D AP2/ERF domain 125 159 IPR036955 GO:0003700|GO:0006355
Phac1g02531 484 Gene3D AP2/ERF domain 170 209 IPR036955 GO:0003700|GO:0006355
Phac1g02531 484 ProSiteProfiles AP2/ERF domain profile. 126 207 IPR001471 GO:0003700|GO:0006355
Phac1g02531 484 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 87 343 - -
Phac1g02531 484 SUPERFAMILY DNA-binding domain 176 209 IPR016177 GO:0003677
Phac1g02531 484 SMART rav1_2 126 213 IPR001471 GO:0003700|GO:0006355
Phac1g02531 484 SMART rav1_2 243 306 IPR001471 GO:0003700|GO:0006355
Phac1g02531 484 ProSiteProfiles AP2/ERF domain profile. 243 300 IPR001471 GO:0003700|GO:0006355
Phac1g02531 484 Pfam AP2 domain 242 292 IPR001471 GO:0003700|GO:0006355
Phac1g02531 484 MobiDBLite consensus disorder prediction 1 26 - -
Phac1g02531 484 FunFam AP2-like ethylene-responsive transcription factor 242 302 - -
Phac1g02531 484 MobiDBLite consensus disorder prediction 7 26 - -
Phac1g02531 484 MobiDBLite consensus disorder prediction 332 352 - -
Phac1g02531 484 PRINTS Ethylene responsive element binding protein signature 244 255 IPR001471 GO:0003700|GO:0006355
Phac1g02531 484 PRINTS Ethylene responsive element binding protein signature 282 302 IPR001471 GO:0003700|GO:0006355
Phac1g02531 484 MobiDBLite consensus disorder prediction 106 126 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g02531 Phac-Chr1 34773110 34776144 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac1g02531 101 336 AP2-EREBP Transcription Factor Family AT4G36920 68.619 1.10e-91 284
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Phac1g02531 AP2 1.1e-09 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g02531 K09284 - gmx:100797238 754.977