Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g02530 ATGCTGGATCTTAACCTCAACGCCGATTCCCCCTCCGACAACAACCACACGCCCCCGCTCTCCGTCGCTCAAATGGAGAGCTCCGGAAGCTTCAGTTCCTCCGTCGTCAATGCTGCCGACACCGATGACTCCTGCTCCTACGGCGACACCGTCGCCTACAACTTCGCCATCCTCAACAACAGCGCCTCCTTCTCCGCTGGAGAATCCTCCGTCCGCACCATCCAGCTCTTTCCGGCGACCGACTCCGGTGTCTCGCCGGCTTGGCTGGATGTCTCGTCGAAGGTGGATCAGCACGGTGTCGCGGCGGAGCAGATGATCACTCCGCGGCAGCCGCAGGTGAAGAAGAGCCGCCGCGGACCGAGGTCACGAAGCTCGCAGTATCGCGGCGTCACTTTCTATCGCAGAACAGGAAGATGGGAATCGCACATTTGGGATTGTGGCAAACAAGTGTACTTAGGTGGATTTGACACGGCGCATGCTGCGGCAAGGGCGTATGATCGAGCTGCGATCAAGTTCCGTGGGGTTGATGCCGATATCAATTTCAACGTTAGCGATTACGATGAGGATATAAAGCAGATGAGTAATTTCACGAAGGAGGAGTTTGTGCATATTCTGCGTCGACAGAGCACTGGTTTTTCAAGGGGAAGCTCCAAATACAGGGGAGTTACTCTGCATAAGTGCGGGCGATGGGAAGCTCGTATGGGGCAGTTTCTGGGTAAAAAGTATATATATCTCGGGCTATTCGACAGCGAATTAGAGGCTGCAAGAGCGTATGATAGGGCTGCTATAAAATGCAATGGAAGGGAAGCAGTTACAAACTTCGAGCCCAGCATATACGAAGGGGAGGTGATTTCCCAATCTGATAATGAAGATGGCAAGCAAATTCTTGATCTTAACCTGGGCATAGCTCCCCCTTCTTACTCTGACAGTCAAATCAAGAACACACCCAGCAACGGGAGTGGTTTGAAAGCTCCACCCAGCTGGGATGATAGCCCTGTCAAAAAGAGATTTATGGTAAGGTTGATGAGTGTTGTATAG 1038 0.526 MLDLNLNADSPSDNNHTPPLSVAQMESSGSFSSSVVNAADTDDSCSYGDTVAYNFAILNNSASFSAGESSVRTIQLFPATDSGVSPAWLDVSSKVDQHGVAAEQMITPRQPQVKKSRRGPRSRSSQYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAHAAARAYDRAAIKFRGVDADINFNVSDYDEDIKQMSNFTKEEFVHILRRQSTGFSRGSSKYRGVTLHKCGRWEARMGQFLGKKYIYLGLFDSELEAARAYDRAAIKCNGREAVTNFEPSIYEGEVISQSDNEDGKQILDLNLGIAPPSYSDSQIKNTPSNGSGLKAPPSWDDSPVKKRFMVRLMSVV* 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g02530 345 Gene3D AP2/ERF domain 217 276 IPR036955 GO:0003700|GO:0006355
Phac1g02530 345 Gene3D AP2/ERF domain 125 184 IPR036955 GO:0003700|GO:0006355
Phac1g02530 345 CDD AP2 126 184 IPR001471 GO:0003700|GO:0006355
Phac1g02530 345 MobiDBLite consensus disorder prediction 307 328 - -
Phac1g02530 345 MobiDBLite consensus disorder prediction 1 26 - -
Phac1g02530 345 MobiDBLite consensus disorder prediction 7 26 - -
Phac1g02530 345 SUPERFAMILY DNA-binding domain 125 184 IPR016177 GO:0003677
Phac1g02530 345 FunFam AP2-like ethylene-responsive transcription factor 125 184 - -
Phac1g02530 345 Pfam AP2 domain 126 174 IPR001471 GO:0003700|GO:0006355
Phac1g02530 345 Pfam AP2 domain 217 267 IPR001471 GO:0003700|GO:0006355
Phac1g02530 345 PRINTS Ethylene responsive element binding protein signature 257 277 IPR001471 GO:0003700|GO:0006355
Phac1g02530 345 PRINTS Ethylene responsive element binding protein signature 219 230 IPR001471 GO:0003700|GO:0006355
Phac1g02530 345 ProSiteProfiles AP2/ERF domain profile. 126 182 IPR001471 GO:0003700|GO:0006355
Phac1g02530 345 ProSiteProfiles AP2/ERF domain profile. 218 275 IPR001471 GO:0003700|GO:0006355
Phac1g02530 345 CDD AP2 217 277 IPR001471 GO:0003700|GO:0006355
Phac1g02530 345 MobiDBLite consensus disorder prediction 307 324 - -
Phac1g02530 345 FunFam AP2-like ethylene-responsive transcription factor 217 277 - -
Phac1g02530 345 SUPERFAMILY DNA-binding domain 217 277 IPR016177 GO:0003677
Phac1g02530 345 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 87 308 - -
Phac1g02530 345 SMART rav1_2 126 188 IPR001471 GO:0003700|GO:0006355
Phac1g02530 345 SMART rav1_2 218 281 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g02530 Phac-Chr1 34773110 34776144 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac1g02530 73 311 AP2-EREBP Transcription Factor Family AT4G36920 67.568 2.20e-99 298
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-AP2 Phac1g02530 AP2 6.8e-10 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g02530 K09284 - gmx:100797238 565.459