Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g02528 ATGCTGGATCTTAACCTCAACGCCGATTCCCCCTCCGACAACAACCACACGCCCCCGCTCTCCGTCGCTCAAATGGAGAGCTCCGGAAGCTTCAGTTCCTCCGTCGTCAATGCTGCCGACACCGATGACTCCTGCTCCTACGGCGACACCGTCGCCTACAACTTCGCCATCCTCAACAACAGCGCCTCCTTCTCCGCTGGAGAATCCTCCGTCCGCACCATCCAGCTCTTTCCGGCGACCGACTCCGGTGTCTCGCCGGCTTGGCTGGATGTCTCGTCGAAGGTGGATCAGCACGGTGTCGCGGCGGAGCAGATGATCACTCCGCGGCAGCCGCAGGTGAAGAAGAGCCGCCGCGGACCGAGGTCACGAAGCTCGCAGTATCGCGGCGTCACTTTCTATCGCAGAACAGGAAGATGGGAATCGCACATTTGGGATTGTGGCAAACAAGTGTACTTAGGTGAGGTCCCCATTAGAGAATTCGTTTTACATTATGCGCTTCACTTTCTTCAATATCGCTTTCTTTCTTTTGTAGGTGGATTTGACACGGCGCATGCTGCGGCAAGGGCGTATGATCGAGCTGCGATCAAGTTCCGTGGGGTTGATGCCGATATCAATTTCAACGTTAGCGATTACGATGAGGATATAAAGCAGATGAGTAATTTCACGAAGGAGGAGTTTGTGCATATTCTGCGTCGACAGAGCACTGGTTTTTCAAGGGGAAGCTCCAAATACAGGGGAGTTACTCTGCATAAGTGCGGGCGATGGGAAGCTCGTATGGGGCAGTTTCTGGGTAAAAAGTATATATATCTCGGGCTATTCGACAGCGAATTAGAGGCTGCAAGAGCGTATGATAGGGCTGCTATAAAATGCAATGGAAGGGAAGCAGTTACAAACTTCGAGCCCAGCATATACGAAGGGGAGGTGATTTCCCAATCTGATAATGAAGATGGCAAGCAAATTCTTGATCTTAACCTGGGCATAGCTCCCCCTTCTTACTCTGACAGTCAAATCAAGAACACACCCAGCAACGGGAGTGGTTTGAAAGCTCCACCCAGCTGGGATGATAGCCCTGTCAAAAAGAGATTTATGTTTGAGCACTCTGGATCGAGATCGTTGAATGTCCAGCCATCTCATGGCATCTCCAGAGTATCTGGGCATCATCCTTCCGCCTGGAATGATAGCAATTTCTTTCCCATCTACGAGGTGATTCTCATATATTCTTATGGCCGGATAAATAGTTTTTGCTGA 1248 0.5088 MLDLNLNADSPSDNNHTPPLSVAQMESSGSFSSSVVNAADTDDSCSYGDTVAYNFAILNNSASFSAGESSVRTIQLFPATDSGVSPAWLDVSSKVDQHGVAAEQMITPRQPQVKKSRRGPRSRSSQYRGVTFYRRTGRWESHIWDCGKQVYLGEVPIREFVLHYALHFLQYRFLSFVGGFDTAHAAARAYDRAAIKFRGVDADINFNVSDYDEDIKQMSNFTKEEFVHILRRQSTGFSRGSSKYRGVTLHKCGRWEARMGQFLGKKYIYLGLFDSELEAARAYDRAAIKCNGREAVTNFEPSIYEGEVISQSDNEDGKQILDLNLGIAPPSYSDSQIKNTPSNGSGLKAPPSWDDSPVKKRFMFEHSGSRSLNVQPSHGISRVSGHHPSAWNDSNFFPIYEVILIYSYGRINSFC* 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g02528 415 CDD AP2 242 302 IPR001471 GO:0003700|GO:0006355
Phac1g02528 415 Gene3D AP2/ERF domain 242 301 IPR036955 GO:0003700|GO:0006355
Phac1g02528 415 Gene3D AP2/ERF domain 125 159 IPR036955 GO:0003700|GO:0006355
Phac1g02528 415 Gene3D AP2/ERF domain 171 209 IPR036955 GO:0003700|GO:0006355
Phac1g02528 415 ProSiteProfiles AP2/ERF domain profile. 126 207 IPR001471 GO:0003700|GO:0006355
Phac1g02528 415 SMART rav1_2 126 213 IPR001471 GO:0003700|GO:0006355
Phac1g02528 415 SMART rav1_2 243 306 IPR001471 GO:0003700|GO:0006355
Phac1g02528 415 ProSiteProfiles AP2/ERF domain profile. 243 300 IPR001471 GO:0003700|GO:0006355
Phac1g02528 415 MobiDBLite consensus disorder prediction 1 26 - -
Phac1g02528 415 MobiDBLite consensus disorder prediction 7 26 - -
Phac1g02528 415 FunFam AP2-like ethylene-responsive transcription factor 242 302 - -
Phac1g02528 415 SUPERFAMILY DNA-binding domain 242 302 IPR016177 GO:0003677
Phac1g02528 415 PRINTS Ethylene responsive element binding protein signature 282 302 IPR001471 GO:0003700|GO:0006355
Phac1g02528 415 PRINTS Ethylene responsive element binding protein signature 244 255 IPR001471 GO:0003700|GO:0006355
Phac1g02528 415 SUPERFAMILY DNA-binding domain 125 209 IPR016177 GO:0003677
Phac1g02528 415 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 87 335 - -
Phac1g02528 415 MobiDBLite consensus disorder prediction 106 126 - -
Phac1g02528 415 Pfam AP2 domain 242 292 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g02528 Phac-Chr1 34773110 34776144 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac1g02528 73 336 AP2-EREBP Transcription Factor Family AT4G36920 61.268 2.81e-92 283
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Phac1g02528 AP2 8.9e-10 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g02528 K09284 - gmx:100797238 608.216