Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g02525 ATGGCAATGGCGCCCTCAACTCCCTCTAGTGGCTCTGGCAAGAAGGTCAGAAAGCCTTATACTATCACCAAGTCTAGGGAGAGCTGGTCTGAGGAGGAGCATGACAAGTTTCTCGAAGCTCTTCAACTATTTGACAGAGATTGGAAGAAAATTGAGGATTTTGTTGGTTCAAAAACTGTTATTCAGATTAGGAGTCATGCCCAGAAGTACTTTCTGAAAGTTCAGAAGAACGGGACAGTAGCACATGTGCCTCCTCCTCGTCCTAAGCGTAAAGCTGCTCATCCTTACCCCCAAAAGGCATTCAAAAATGTTTTGGTGCCATTGCCAGCTTCCCTGGCATATGTTTCTTCCACTAGTACCCCTCCACCCGGGTATGCCACATGGGATGAAAATTTCTTGCTTGTGAATTCTGGATCCAACAAATCACTGCCCTATCAGGATGAACTCACCAATCTTCATGGAGATGAAGGCATGCATGCTTCTTTTTAA 489 0.454 MAMAPSTPSSGSGKKVRKPYTITKSRESWSEEEHDKFLEALQLFDRDWKKIEDFVGSKTVIQIRSHAQKYFLKVQKNGTVAHVPPPRPKRKAAHPYPQKAFKNVLVPLPASLAYVSSTSTPPPGYATWDENFLLVNSGSNKSLPYQDELTNLHGDEGMHASF* 163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g02525 162 SMART sant 25 73 IPR001005 -
Phac1g02525 162 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 21 75 IPR017930 -
Phac1g02525 162 NCBIfam myb-like DNA-binding domain, SHAQKYF class 24 73 IPR006447 GO:0003677
Phac1g02525 162 ProSiteProfiles Myb-like domain profile. 21 71 IPR001005 -
Phac1g02525 162 ProSiteProfiles SANT domain profile. 24 77 IPR017884 -
Phac1g02525 162 CDD SANT 28 71 IPR001005 -
Phac1g02525 162 Pfam Myb-like DNA-binding domain 26 71 IPR001005 -
Phac1g02525 162 PANTHER SWI/SNF COMPLEX-RELATED 12 124 - -
Phac1g02525 162 FunFam protein REVEILLE 6 isoform X1 28 76 - -
Phac1g02525 162 Gene3D - 29 76 - -
Phac1g02525 162 SUPERFAMILY Homeodomain-like 20 76 IPR009057 -
Phac1g02525 162 MobiDBLite consensus disorder prediction 1 16 - -
Phac1g02525 162 MobiDBLite consensus disorder prediction 1 25 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g02525 Phac-Chr1 34753020 34756476 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Phac1g02525 Myb_DNA-binding 4e-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g02525 - - gmx:100783482 270.781