Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g02518 ATGGATATTAAGGAAGCAGAAAGGGTGGTGATTGCCAAACCTGTTGCTTCAAGGCCTACTTGTTCTACTTTCAAATCTTTCTCAGAGCTCCTAGCTGGTGCAATCAATGTTTCTCCTGATATTGTGTCTTCTCAAGCAACGGTTTCTGCCATTAGACCCAAGACTGTGAGGTTCAAGCCTACAGCATTGAACCACCCCCCTGCTGGGTTTGATTCTTCTCAGGCAGATACTTTTGGAGCTGCACTTAGTAACCCTTCTGAAAAGAGTCTAAAACTTGACACCAATCAGTCCCTCATATACAAGCCAACGGCAAAACTCGTGTCAAAGACAACTGTGTCTCTTTTGGCAAATATGAAGGGAAATTGCAGCACTGGTCAGCAGCAAACACGGCAATTAATGGAGGCCAATTTTCAACATTCCATCAATGAAAAATGTAGAACCAACATGAGTTCACATCTTGATCAGAGTATTGCCCTGCATTCAGAAATAAATCAGATCAGTGAACCTAGTAAGATGGTGCAGCAGAACACAGAGGAAGATCAAAAGACTTTAACATCCTCAGCGAATTGTGATCGACCTTCTTATGATGGGTACAATTGGAGGAAATATGGTCAGAAGCAAGTAAAAGGGAGTGAGTACCCCCGAAGTTACTACAAGTGCACACATCCTAATTGTCCAGTGAAAAAGAAGGTTGAAAGATCATTTGATGGGCAGATTGCAGAAATTGTTTATAAAGGTGAGCACAACCATTCGAAGCCACAGCTTCCTAAACGAAACACAGCATCAGGGACACAAGGTTCGGGGGTGGTGTCTGATGGAATGGTTCAAGATATGTGGAGTAATAGTCACAGTGAGAGGAATGAAGGCAATGATAGTAGAGTTGATAACACTGGAGGACTCTCTGTGCTTTCAGATTATTATGTCAAAGTTCCACAGCCCAATGACTCTGTTCTAAATATTGGTGCAACTAATGCTGGTGGAGGAAGCACGGAAAACTCCTGTGGTCTAAGTGGGGAATGTGAGGAAGCAAGCAAGGGTTTTGAGGCACAGGAAGAAGAACCCAGAAGTAAAAGAAGGAAAAATGAGAATCAATCTAATGAAGTAGCATTATCAGAGGAAGGTTTAGTAGAGCCGCGGATTGTGATGCAAAGTTTCACGGATTCTGAAATACTTGGAGATGGATTTCGCTGGAGGAAATATGGGCAGAAGGTGGTGAAGGGTAATCCATATCCCAGAAGTTACTATAGGTGTACTAATATTAAGTGCAACGTTCGCAAACATGTGGAGAGAGCATTAGATGACCCGAGATCATTTGTGACGACATATGAGGGAAAACACAATCATGAAATGCCTCTGAAGAACACTGAAAGAGATTCACAGGCTTCTCTTAGTAAAGATAAACCACATAATTAA 1413 0.4225 MDIKEAERVVIAKPVASRPTCSTFKSFSELLAGAINVSPDIVSSQATVSAIRPKTVRFKPTALNHPPAGFDSSQADTFGAALSNPSEKSLKLDTNQSLIYKPTAKLVSKTTVSLLANMKGNCSTGQQQTRQLMEANFQHSINEKCRTNMSSHLDQSIALHSEINQISEPSKMVQQNTEEDQKTLTSSANCDRPSYDGYNWRKYGQKQVKGSEYPRSYYKCTHPNCPVKKKVERSFDGQIAEIVYKGEHNHSKPQLPKRNTASGTQGSGVVSDGMVQDMWSNSHSERNEGNDSRVDNTGGLSVLSDYYVKVPQPNDSVLNIGATNAGGGSTENSCGLSGECEEASKGFEAQEEEPRSKRRKNENQSNEVALSEEGLVEPRIVMQSFTDSEILGDGFRWRKYGQKVVKGNPYPRSYYRCTNIKCNVRKHVERALDDPRSFVTTYEGKHNHEMPLKNTERDSQASLSKDKPHN* 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g02518 470 MobiDBLite consensus disorder prediction 246 272 - -
Phac1g02518 470 SMART WRKY_cls 194 252 IPR003657 GO:0003700|GO:0006355|GO:0043565
Phac1g02518 470 SMART WRKY_cls 391 450 IPR003657 GO:0003700|GO:0006355|GO:0043565
Phac1g02518 470 FunFam WRKY transcription factor 57 377 451 - -
Phac1g02518 470 MobiDBLite consensus disorder prediction 344 366 - -
Phac1g02518 470 MobiDBLite consensus disorder prediction 255 272 - -
Phac1g02518 470 Pfam WRKY DNA -binding domain 393 449 IPR003657 GO:0003700|GO:0006355|GO:0043565
Phac1g02518 470 Pfam WRKY DNA -binding domain 196 250 IPR003657 GO:0003700|GO:0006355|GO:0043565
Phac1g02518 470 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 136 460 IPR044810 GO:0003700
Phac1g02518 470 MobiDBLite consensus disorder prediction 321 370 - -
Phac1g02518 470 ProSiteProfiles WRKY domain profile. 386 451 IPR003657 GO:0003700|GO:0006355|GO:0043565
Phac1g02518 470 Gene3D WRKY domain 377 452 IPR036576 GO:0003700|GO:0006355|GO:0043565
Phac1g02518 470 Gene3D WRKY domain 179 254 IPR036576 GO:0003700|GO:0006355|GO:0043565
Phac1g02518 470 SUPERFAMILY WRKY DNA-binding domain 384 451 IPR036576 GO:0003700|GO:0006355|GO:0043565
Phac1g02518 470 MobiDBLite consensus disorder prediction 321 337 - -
Phac1g02518 470 SUPERFAMILY WRKY DNA-binding domain 193 253 IPR036576 GO:0003700|GO:0006355|GO:0043565
Phac1g02518 470 ProSiteProfiles WRKY domain profile. 196 253 IPR003657 GO:0003700|GO:0006355|GO:0043565
Phac1g02518 470 MobiDBLite consensus disorder prediction 443 470 - -
Phac1g02518 470 FunFam WRKY transcription factor 180 254 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g02518 Phac-Chr1 34710079 34716102 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac1g02518 378 464 WRKY Transcription Factor Family AT2G37260 45.263 4.90e-16 77.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Phac1g02518 WRKY 6.5e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g02518 - - vra:106757963 862.448