Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g02516 ATGGATATTAAGGAAGCAGAAAGGGTGGTGATTGCCAAACCTGTTGCTTCAAGGCCTACTTGTTCTACTTTCAAATCTTTCTCAGAGCTCCTAGCTGGTGCAATCAATGTTTCTCCTGATATTGTGTCTTCTCAAGCAACGGTTTCTGCCATTAGACCCAAGACTGTGAGGTTCAAGCCTACAGCATTGAACCACCCCCCTGCTGGGTTTGATTCTTCTCAGGCAGATACTTTTGGAGCTGCACTTAGTAACCCTTCTGAAAAGAGTCTAAAACTTGACACCAATCAGTCCCTCATATACAAGCCAACGGCAAAACTCGTGTCAAAGACAACTGTGTCTCTTTTGGCAAATATGGGAAATTGCAGCACTGGTCAGCAGCAAACACGGCAATTAATGGAGGCCAATTTTCAACATTCCATCAATGAAAAATGTAGAACCAACATGAGTTCACATCTTGATCAGAGTATTGCCCTGCATTCAGAAATAAATCAGATCAGTGAACCTAGTAAGATGGTGCAGCAGAACACAGAGGAAGATCAAAAGACTTTAACATCCTCAGCGAATTGTGATCGACCTTCTTATGATGGGTACAATTGGAGGAAATATGGTCAGAAGCAAGTAAAAGGGAGTGAGTACCCCCGAAGTTACTACAAGTGCACACATCCTAATTGTCCAGTGAAAAAGAAGGTTGAAAGATCATTTGATGGGCAGATTGCAGAAATTGTTTATAAAGGTGAGCACAACCATTCGAAGCCACAGCTTCCTAAACGAAACACAGCATCAGGGACACAAGGTTCGGGGGTGGTGTCTGATGGAATGGTTCAAGATATGTGGAGTAATAGTCACAGTGAGAGGAATGAAGGCAATGATAGTAGAGTTGATAACACTGGAGGACTCTCTGTGCTTTCAGATTATTATGTCAAAGTTCCACAGCCCAATGACTCTGTTCTAAATATTGGTGCAACTAATGCTGGTGGAGGAAGCACGGAAAACTCCTGTGGTCTAAGTGGGGAATGTGAGGAAGCAAGCAAGGGTTTTGAGGCACAGGAAGAAGAACCCAGAAGTAAAAGAAGGAAAAATGAGAATCAATCTAATGAAGTAGCATTATCAGAGGAAGGTTTAGTAGAGCCGCGGATTGTGATGCAAAGTTTCACGGATTCTGAAATACTTGGAGATGGATTTCGCTGGAGGAAATATGGGCAGAAGGTGGTGAAGGGTAATCCATATCCCAGAAGTTACTATAGGTGTACTAATATTAAGTGCAACGTTCGCAAACATGTGGAGAGAGCATTAGATGACCCGAGATCATTTGTGACGACATATGAGGGAAAACACAATCATGAAATGCCTCTGAAGAACACTGAAAGAGATTCACAGGCTTCTCTTAGTAAAGATAAACCACATAATTAA 1410 0.4227 MDIKEAERVVIAKPVASRPTCSTFKSFSELLAGAINVSPDIVSSQATVSAIRPKTVRFKPTALNHPPAGFDSSQADTFGAALSNPSEKSLKLDTNQSLIYKPTAKLVSKTTVSLLANMGNCSTGQQQTRQLMEANFQHSINEKCRTNMSSHLDQSIALHSEINQISEPSKMVQQNTEEDQKTLTSSANCDRPSYDGYNWRKYGQKQVKGSEYPRSYYKCTHPNCPVKKKVERSFDGQIAEIVYKGEHNHSKPQLPKRNTASGTQGSGVVSDGMVQDMWSNSHSERNEGNDSRVDNTGGLSVLSDYYVKVPQPNDSVLNIGATNAGGGSTENSCGLSGECEEASKGFEAQEEEPRSKRRKNENQSNEVALSEEGLVEPRIVMQSFTDSEILGDGFRWRKYGQKVVKGNPYPRSYYRCTNIKCNVRKHVERALDDPRSFVTTYEGKHNHEMPLKNTERDSQASLSKDKPHN* 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g02516 469 ProSiteProfiles WRKY domain profile. 195 252 IPR003657 GO:0003700|GO:0006355|GO:0043565
Phac1g02516 469 SUPERFAMILY WRKY DNA-binding domain 383 450 IPR036576 GO:0003700|GO:0006355|GO:0043565
Phac1g02516 469 MobiDBLite consensus disorder prediction 320 369 - -
Phac1g02516 469 SMART WRKY_cls 193 251 IPR003657 GO:0003700|GO:0006355|GO:0043565
Phac1g02516 469 SMART WRKY_cls 390 449 IPR003657 GO:0003700|GO:0006355|GO:0043565
Phac1g02516 469 FunFam WRKY transcription factor 179 253 - -
Phac1g02516 469 ProSiteProfiles WRKY domain profile. 385 450 IPR003657 GO:0003700|GO:0006355|GO:0043565
Phac1g02516 469 MobiDBLite consensus disorder prediction 245 271 - -
Phac1g02516 469 MobiDBLite consensus disorder prediction 254 271 - -
Phac1g02516 469 MobiDBLite consensus disorder prediction 320 336 - -
Phac1g02516 469 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 135 459 IPR044810 GO:0003700
Phac1g02516 469 FunFam WRKY transcription factor 57 376 450 - -
Phac1g02516 469 Gene3D WRKY domain 376 451 IPR036576 GO:0003700|GO:0006355|GO:0043565
Phac1g02516 469 Gene3D WRKY domain 175 253 IPR036576 GO:0003700|GO:0006355|GO:0043565
Phac1g02516 469 MobiDBLite consensus disorder prediction 442 469 - -
Phac1g02516 469 Pfam WRKY DNA -binding domain 195 249 IPR003657 GO:0003700|GO:0006355|GO:0043565
Phac1g02516 469 Pfam WRKY DNA -binding domain 392 448 IPR003657 GO:0003700|GO:0006355|GO:0043565
Phac1g02516 469 SUPERFAMILY WRKY DNA-binding domain 192 252 IPR036576 GO:0003700|GO:0006355|GO:0043565
Phac1g02516 469 MobiDBLite consensus disorder prediction 343 365 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g02516 Phac-Chr1 34710079 34716102 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac1g02516 377 463 WRKY Transcription Factor Family AT2G37260 45.263 4.84e-16 77.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Phac1g02516 WRKY 6.5e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g02516 - - vra:106757963 855.899