Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g02513 ATGGGTTGGATTCCCTGTTCTGGATATTCAGGAACTAAGAACAAGATTGAGAAGATGGAAGTTCAGGACAGTCTCGTTGGTCAGATCAAAGCCACCCCAGCACAGACATTCCCATTCCGTGAATTGGCAACTGCAACTAGAAATTTTAGAACTGAATGTCTTTTGGGAGAGGGAGGCTTTGGTAGAGTGTACAAAGGGCGTCTGGAAAGTATTAATCAGGTTGTCGCCATTAAGCAACTTGACCGAAATGGACTCCAAGGAAATAGGGAATTCCTTGTTGAAGTGTTGATGTTAAGTCTACTTCATCATCCTAACCTTGTCAACCTTATTGGTTATTGTGCTGATGGAGATCAAAGGCTTCTGGTTTATGAATATATGCCGTTAGGATCCTTGGAAGACCACTTGCATGATATTCCTCTTGGCAAGAAACAACTAGAGTGGAACACGCGAATGAGAATAGCTGCTGGTGCAGCAAAGGGATTGGAATATCTACACGACAAAGCTAATCCTCCTGTCATCTACCGTGATTTAAAGTGCTCTAACATTTTGCTTGGTGAGGGGTATCACCCAAAGTTATCTGATTTTGGTTTGGCTAAGCTTGGCCCAGTTGGGGAAAACACACATGTATCAACTAGAGTTATGGGCACCTATGGATATTGTGCTCCAGAGTATGCCATGACTGGTCAACTGACTCTGAAATCAGATGTTTATAGCTTTGGTGTAGTTCTTCTGGAAATAATTACCGGAAGGAAAGCAATTGACAATTCAAAATCTGCAGGAGAGCAGAATCTTGTTGCATGGGCTAGACCCTTGTTTAGGGATCGAAGAAAGTTTTCACAAATGGCTGATCCAACACTCCAAGGTCAATATCCTCCAAGAGGACTATACCAGGCTCTTGCTGTTGCAGCAATGTGTGTTCAGGAGCAGGCTAACATGCGTCCAGTTATAGCTGATGTTGTCACAGCTTTGTCTTACCTTGCTAAACAAAAATATGATCCCAATACACACACAGTTCAAAACTCTCGCCTTGCTCCGGGTACTCCTCCTAGAACCAGGAGGGGGCTATGA 1068 0.4354 MGWIPCSGYSGTKNKIEKMEVQDSLVGQIKATPAQTFPFRELATATRNFRTECLLGEGGFGRVYKGRLESINQVVAIKQLDRNGLQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSLEDHLHDIPLGKKQLEWNTRMRIAAGAAKGLEYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGENTHVSTRVMGTYGYCAPEYAMTGQLTLKSDVYSFGVVLLEIITGRKAIDNSKSAGEQNLVAWARPLFRDRRKFSQMADPTLQGQYPPRGLYQALAVAAMCVQEQANMRPVIADVVTALSYLAKQKYDPNTHTVQNSRLAPGTPPRTRRGL* 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g02513 355 ProSitePatterns Serine/Threonine protein kinases active-site signature. 172 184 IPR008271 GO:0004672|GO:0006468
Phac1g02513 355 ProSitePatterns Protein kinases ATP-binding region signature. 55 78 IPR017441 GO:0005524
Phac1g02513 355 PANTHER OS07G0668900 PROTEIN 28 335 - -
Phac1g02513 355 FunFam Serine/threonine-protein kinase PBS1 20 125 - -
Phac1g02513 355 FunFam Serine/threonine-protein kinase PBS1 126 341 - -
Phac1g02513 355 Pfam Protein tyrosine and serine/threonine kinase 53 321 IPR001245 GO:0004672|GO:0006468
Phac1g02513 355 SMART serkin_6 49 326 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac1g02513 355 MobiDBLite consensus disorder prediction 336 355 - -
Phac1g02513 355 ProSiteProfiles Protein kinase domain profile. 49 326 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac1g02513 355 SUPERFAMILY Protein kinase-like (PK-like) 29 323 IPR011009 -
Phac1g02513 355 Gene3D Phosphorylase Kinase; domain 1 9 125 - -
Phac1g02513 355 Gene3D Transferase(Phosphotransferase) domain 1 126 344 - -
Phac1g02513 355 CDD STKc_IRAK 55 323 - -
Phac1g02513 355 PIRSF ILK 11 339 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g02513 Phac-Chr1 34703572 34707628 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac1g02513 12 326 Glycoside Hydrolase AT3G07070 68.254 5.32e-160 452
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Phac1g02513 PK_Tyr_Ser-Thr 9e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g02513 - - gmx:100818024 679.478