Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g02493 ATGGGGAAGGGAGGCCAAGATTATGGGAATCGAGAGAAGGGTTCAGAAGATTCGGACCGTGATATCTTCAAGGCTTGGGCCAAGGACGTGCGTGAGTGCGAGGAACACTTCAAGGTGAATGTTAAAGTGGGTTTGAATCAAGAAGAGGTCGAGAAACGGCAAAAGATTTATGGATTGAACGAGTTGGAGAAACACGACGGCCAATCGATATGGAGTCTGATTATCGACCAGTTCAACGACACTCTGGTTCGGATTCTACTTGCCGCCGCCATAATTTCCTTCGTGCTCGCTTGGTACGACGGCGACGAAGGCGGTGAGATGGAGATAACGGCGTTCGTTGAGCCTCTGGTGATATTCCTCATACTAATCGTGAACGCGATTGTTGGCGTGTGGCAGGAGAGCAATGCGGAGAAGGCGCTTGATGCGCTGAAAGAGATTCAGTCGGAGCACGCGGTGGTGATTCGGGAGGGCGCGAAAATCCTCAGTTTGCCAGCGAAGGATCTCGTCCCTGGCGACGTCGTGGAGCTTAAGGTTGGTGATAAGGTCCCTGCTGATATGCGCGTTGTGGAATTGATCAGTTCCACTTTGCGGTTGGAGCAGGGTTCTTTGACTGGAGAAAGTGAAGCGGTTAATAAGAGTAACAAGCGTGTGGAGGAGGATGCCGATATCCAGGGGAAGAGAAGTATGGTTTTCGCGGGGACCACTGTTGTTAACGGGAATTGCATTTGCTTGGTCACTCAGACGGGCATGGATACGGAAATTGGGAAGGTGCATAAGCAGATACATGTTGCGTCGCAGAGTGAGGAAGATACCCCATTGAAGAAGAAGCTCAACGAGTTTGGTGAGAAGCTAACCATGATAATTGGACTTATATGTATTTTGGTTTGGCTCATCAATGTTAAGTACTTCCTTTCATGGGAGTACGTGGATGGATGGCCCAGGAATTTCAAGTTTTCGTTTGAGAAGTGTACCTATTACTTTGAAATTGCTGTGGCGCTGGCTGTGGCTGCTATTCCAGAAGGTTTGCCGGCTGTCATCACCACTTGCCTAGCTCTTGGTACTCGCAAGATGGCCCAGAAGAATGCCCTGGTTCGGAAGCTACCTAGCGTGGAGACTCTGGGTTGTACCACTGTGATTTGTTCCGATAAAACTGGTACACTGACTACCAACCAAATGGCTGTGTCGAAATTAGTCGCAATTGGCCATAATGTCGATACACTAAGAGCCTTCAAGGTGGAAGGAACTACGTACAATCCAGCTGATGGTCAAATAGAGAACTGGCCGACTGTTGGATTGGATGCTAATCTTCAGATGATTGCAAAAATAGCTGCTATCTGTAATGATGCTGGAGTCGCACAATCAGAGCATAAGTTTGTCGCCCATGGAATGCCTACTGAAGCAGCTTTAAAGGTTTTGGTAGAGAAGATGGGCCATCCTGATGGATCCATGGATGTTCGGTCTGCAAGCACAAGTACCTTGCTGCGTTGTTGTGAATGGTGGAGTGAGCATGACCGACGGCTTGCTACTCTCGAGTTTGACCGTGACAGGAAGTCAATGGGTGTTATTGTGGACTCTGGTCTAGGAAAAAGGTCGCTTCTAGTTAAGGGTGCTGTGGAAAACGTGTTAGACAGAAGCTCTAAAATTCAGTTGCGAGATGGTTCTGTAGTGGACCTAGATGATAATGCTAGGAACCTTGTATTGCAAGCACTTCATGAAATGTCAACTAGCGCATTGCGCTGTTTGGGATTTGCATACAAGGATGAGCTCCCCAAATTTGAAAACTACAGTGGTAGTGACGATCATCCAGCACACCAGCTTTTACTCAATCCTTCCAATTATTCATCAATTGAAAGTGAACTTATTTTTGTTGGCTTGGTTGGATTGAGGGACCCCCCTAGGGAGGAAGTATACCAAGCAATTGAAGACTGCAGAGAGGCTGGAATCCGTGTTATGGTTATAACTGGGGACAACAAGAACACTGCTGAAGCTATATGCCGTGAAATAGGTGTATTTTCCCCTGATGAAGACATTACTTCTAAAAGTTTAACAGGTAAAGATTTTATGGAATTGCGTGATAAAAAGGCCTATTTGGGTCAGAGTGGTGGCCTGTTGTTTTCAAGGGCTGAACCTAGGCACAAGCAAGAAATTGTGAGGCTGCTCAAAGAGGAAGGAGAGGTGGTGGCCATGACAGGAGATGGTGTTAATGATGCACCTGCCTTGAAGCTTGCAGACATTGGTGTTGCAATGGGTATTGCAGGGACTGAGGTGGCAAAGGAAGCTTCAGATATGGTGTTGGCAGATGATAATTTTAGTTCTATTGTTGCTGCTGTTGGTGAGGGTAGATCTATCTACAATAACATGAAGGCTTTCATAAGGTATATGATCTCTTCAAATATTGGCGAGGTTGCTTCAATATTTTTAACAGCTGCACTAGGTATTCCTGAAGGATTGATACCTGTCCAGCTTCTGTGGGTCAATCTTGTCACTGACGGACCCCCTGCAACTGCTCTAGGATTTAATCCTCCAGATAAGGATATAATGAAGAAGCCTCCTCGTCGCAGTGATGACTCATTAATTAATTTTTGGATTTTATTCCGCTATATGGTTATTGGGATTTATGTTGGATTAGCTACAGTTGGTGTCTTCATCATATGGTATACACACGGTTCTTTCTTGGGTATTGACCTTAGTGGGGATGGACATTCTCTTGTCACTTATACTCAACTTGCCAACTGGGATCAATGCTCCTCATGGAAGAACTTCACTGCTTCTCCATTCACTGCTGGTGCTAAAACTATCACGTTCGACAACCCCTGCGATTACTTTCATACTGGTAAAGTGAAGGCTATGACATTGTCCCTTTCTGTGTTGGTAGCCATTGAAATGTTCAACTCTCTCAATGCCTTATCTGAAGATGGAAGCCTTTTGTCAATGCCCCCTTGGGTCAACCCTTGGCTTCTTTTGGCAATGTCAGTATCATTTGGTCTGCACTTTTTGATCTTGTACGTGCCATTCTTGGCACAAGTATTTGGTATCGTGCCCCTGAGCTTAAACGAGTGGCTTTTGGTTTTGGCTGTTGCACTTCCGGTCATTCTGATTGACGAGATTCTGAAATTTGTGGGGAGATGTACAAGTGGGCCTCGACCATCAGCTGCAAGAAAATCAAAGCAAAAATCAGAGTAG 3183 0.4587 MGKGGQDYGNREKGSEDSDRDIFKAWAKDVRECEEHFKVNVKVGLNQEEVEKRQKIYGLNELEKHDGQSIWSLIIDQFNDTLVRILLAAAIISFVLAWYDGDEGGEMEITAFVEPLVIFLILIVNAIVGVWQESNAEKALDALKEIQSEHAVVIREGAKILSLPAKDLVPGDVVELKVGDKVPADMRVVELISSTLRLEQGSLTGESEAVNKSNKRVEEDADIQGKRSMVFAGTTVVNGNCICLVTQTGMDTEIGKVHKQIHVASQSEEDTPLKKKLNEFGEKLTMIIGLICILVWLINVKYFLSWEYVDGWPRNFKFSFEKCTYYFEIAVALAVAAIPEGLPAVITTCLALGTRKMAQKNALVRKLPSVETLGCTTVICSDKTGTLTTNQMAVSKLVAIGHNVDTLRAFKVEGTTYNPADGQIENWPTVGLDANLQMIAKIAAICNDAGVAQSEHKFVAHGMPTEAALKVLVEKMGHPDGSMDVRSASTSTLLRCCEWWSEHDRRLATLEFDRDRKSMGVIVDSGLGKRSLLVKGAVENVLDRSSKIQLRDGSVVDLDDNARNLVLQALHEMSTSALRCLGFAYKDELPKFENYSGSDDHPAHQLLLNPSNYSSIESELIFVGLVGLRDPPREEVYQAIEDCREAGIRVMVITGDNKNTAEAICREIGVFSPDEDITSKSLTGKDFMELRDKKAYLGQSGGLLFSRAEPRHKQEIVRLLKEEGEVVAMTGDGVNDAPALKLADIGVAMGIAGTEVAKEASDMVLADDNFSSIVAAVGEGRSIYNNMKAFIRYMISSNIGEVASIFLTAALGIPEGLIPVQLLWVNLVTDGPPATALGFNPPDKDIMKKPPRRSDDSLINFWILFRYMVIGIYVGLATVGVFIIWYTHGSFLGIDLSGDGHSLVTYTQLANWDQCSSWKNFTASPFTAGAKTITFDNPCDYFHTGKVKAMTLSLSVLVAIEMFNSLNALSEDGSLLSMPPWVNPWLLLAMSVSFGLHFLILYVPFLAQVFGIVPLSLNEWLLVLAVALPVILIDEILKFVGRCTSGPRPSAARKSKQKSE* 1061
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g02493 1060 SMART Cation_ATPase_N_a_2 24 98 IPR004014 -
Phac1g02493 1060 SFLD Haloacid Dehalogenase 361 782 - -
Phac1g02493 1060 PRINTS P-type cation-transporting ATPase superfamily signature 624 635 - -
Phac1g02493 1060 PRINTS P-type cation-transporting ATPase superfamily signature 730 749 - -
Phac1g02493 1060 PRINTS P-type cation-transporting ATPase superfamily signature 380 394 - -
Phac1g02493 1060 PRINTS P-type cation-transporting ATPase superfamily signature 646 656 - -
Phac1g02493 1060 PRINTS P-type cation-transporting ATPase superfamily signature 754 766 - -
Phac1g02493 1060 PRINTS P-type cation-transporting ATPase superfamily signature 199 213 - -
Phac1g02493 1060 Pfam haloacid dehalogenase-like hydrolase 377 744 - -
Phac1g02493 1060 Gene3D - 390 631 IPR023299 GO:0000166
Phac1g02493 1060 SUPERFAMILY Calcium ATPase, transduction domain A 149 260 IPR008250 -
Phac1g02493 1060 Pfam E1-E2 ATPase 146 360 - -
Phac1g02493 1060 Gene3D - 44 264 - -
Phac1g02493 1060 Gene3D - 377 775 IPR023214 -
Phac1g02493 1060 FunFam Sarcoplasmic/endoplasmic reticulum calcium ATPase 1 237 408 - -
Phac1g02493 1060 SUPERFAMILY HAD-like 378 834 IPR036412 -
Phac1g02493 1060 NCBIfam HAD-IC family P-type ATPase 117 230 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Phac1g02493 1060 NCBIfam HAD-IC family P-type ATPase 704 811 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Phac1g02493 1060 NCBIfam HAD-IC family P-type ATPase 319 401 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Phac1g02493 1060 Pfam Cation transporter/ATPase, N-terminus 26 93 IPR004014 -
Phac1g02493 1060 FunFam calcium-transporting ATPase, endoplasmic reticulum-type 390 631 - -
Phac1g02493 1060 SUPERFAMILY Calcium ATPase, transmembrane domain M 24 1043 IPR023298 -
Phac1g02493 1060 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 387 628 IPR023299 GO:0000166
Phac1g02493 1060 FunFam ECA1 (ER-TYPE CA2+-ATPASE 1) 794 1047 - -
Phac1g02493 1060 Pfam Cation transporting ATPase, C-terminus 815 1040 IPR006068 -
Phac1g02493 1060 FunFam Calcium-transporting ATPase, putative 126 262 - -
Phac1g02493 1060 SFLD p-type atpase 361 782 IPR044492 -
Phac1g02493 1060 PANTHER CALCIUM-TRANSPORTING ATPASE 26 1048 - -
Phac1g02493 1060 FunFam Calcium-transporting P-type ATPase, putative 626 775 - -
Phac1g02493 1060 ProSitePatterns E1-E2 ATPases phosphorylation site. 382 388 IPR018303 -
Phac1g02493 1060 Gene3D - 76 1042 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g02493 Phac-Chr1 34601930 34608470 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac1g02493 1 1060 Primary Pumps ATPases(2) AT1G07670 80.245 0.0 1738
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g02493 K01537 - gmx:100788807 1984.92