Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Phac1g02471 | ATGTTCTGGGTTGGGAGAAAGAGAGAAAGTAACAAGGCACAAGAGAAAGGTTTTGGTTCTGTGGAATTTGAGTGCAAGACCTGCAACCGCAAGTTCTCATCTTTTCAAGCACTGGGAGGGCACAGGGCAAGCCACAAGAAGCAGAAAGTAGAAGGAGAAGAACTGAAAGAACAGGGAAAAAGTCTTAGCTTGTGGAGCAAACCCAAAATGCACGAGTGCTCCATCTGTGGCCAAGAATTCTCTCTGGGGCAGGCTCTGGGAGGACACATGAGAAAACATAGAGGTGTCAGCAACGAAGGGTTTGTTCCTATTCCTTCTATCGACCAAGTTATTGCGAAAATCCCAGTTCTGAAAAGGTCCAACAGCACCAGGGTTATGTGCTTGGACTTGGAGTTACACCTCTAG | 405 | 0.4691 | MFWVGRKRESNKAQEKGFGSVEFECKTCNRKFSSFQALGGHRASHKKQKVEGEELKEQGKSLSLWSKPKMHECSICGQEFSLGQALGGHMRKHRGVSNEGFVPIPSIDQVIAKIPVLKRSNSTRVMCLDLELHL* | 135 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Phac1g02471 | 134 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 25 | 45 | IPR013087 | - | |
Phac1g02471 | 134 | Gene3D | Classic Zinc Finger | 22 | 43 | - | - | |
Phac1g02471 | 134 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 23 | 50 | IPR013087 | - | |
Phac1g02471 | 134 | SUPERFAMILY | beta-beta-alpha zinc fingers | 23 | 93 | IPR036236 | - | |
Phac1g02471 | 134 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 73 | 93 | IPR013087 | - | |
Phac1g02471 | 134 | SMART | c2h2final6 | 71 | 93 | IPR013087 | - | |
Phac1g02471 | 134 | SMART | c2h2final6 | 23 | 45 | IPR013087 | - | |
Phac1g02471 | 134 | Gene3D | Classic Zinc Finger | 53 | 101 | - | - | |
Phac1g02471 | 134 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 71 | 98 | IPR013087 | - | |
Phac1g02471 | 134 | PANTHER | ZINC FINGER PROTEIN ZAT5 | 14 | 132 | - | - | |
Phac1g02471 | 134 | Pfam | C2H2-type zinc finger | 71 | 95 | - | - | |
Phac1g02471 | 134 | Pfam | C2H2-type zinc finger | 23 | 48 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Phac1g02471 | Phac-Chr1 | 34374022 | 34374900 | Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Phac1g02471 | 20 | 132 | C2H2 Transcription Factor Family | AT2G37430 | 52.174 | 3.14e-30 | 105 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | C2H2 | Phac1g02471 | zf-C2H2_6 | 1.3e-09 | CL0361 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Phac1g02471 | - | - | pvu:PHAVU_001G170800g | 256.914 |