Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Phac1g02470 | ATGAAGAGACAGAGAGAAATGGAGGGGTTAGCAACCATAGATTTGGCAAATTGTCTAATGCTTCTGTCTTGCCCCCAACAAAAGAAGTTACAACCAAAATATCTTGAGGGTGTGGAATTTGAATGCAAGACATGCAACAGAAAGTTCTCATCCTTTCAAGCATTGGGTGGCCATAGGGCTAGCCACAAAAGGTCGAAACTTGAGGGGTATGAACACAAAGCAGATGCTATGTCTCTAAGTTTGGGAATTAATAAACCCAAAATGCACGAGTGTACCATTTGTGGACAAGAATTCTCATTGGGACAGGCACTTGGAGGCCACATGAGAAGACATAGAGCTTCCATCAAAGACCATTTTTCTCCAATTAACCATGTTGCACAAGTACCAGTTTTGAAAAGATCAAATAGCTCCAGGGGTATGTGCATGGACTTGAACCTAACTCCGTTAGAGAATGACTTCAAGTTATTGTTTGGAAAGATGGCACCAAATGTTGGTGCCCTAGTCTGA | 507 | 0.4201 | MKRQREMEGLATIDLANCLMLLSCPQQKKLQPKYLEGVEFECKTCNRKFSSFQALGGHRASHKRSKLEGYEHKADAMSLSLGINKPKMHECTICGQEFSLGQALGGHMRRHRASIKDHFSPINHVAQVPVLKRSNSSRGMCMDLNLTPLENDFKLLFGKMAPNVGALV* | 169 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Phac1g02470 | 168 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 40 | 67 | IPR013087 | - | |
Phac1g02470 | 168 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 91 | 111 | IPR013087 | - | |
Phac1g02470 | 168 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 89 | 116 | IPR013087 | - | |
Phac1g02470 | 168 | SMART | c2h2final6 | 40 | 62 | IPR013087 | - | |
Phac1g02470 | 168 | SMART | c2h2final6 | 89 | 111 | IPR013087 | - | |
Phac1g02470 | 168 | Pfam | C2H2-type zinc finger | 40 | 64 | - | - | |
Phac1g02470 | 168 | Pfam | C2H2-type zinc finger | 89 | 113 | - | - | |
Phac1g02470 | 168 | Gene3D | Classic Zinc Finger | 38 | 111 | - | - | |
Phac1g02470 | 168 | SUPERFAMILY | beta-beta-alpha zinc fingers | 40 | 111 | IPR036236 | - | |
Phac1g02470 | 168 | PANTHER | ZINC FINGER PROTEIN ZAT5 | 12 | 151 | - | - | |
Phac1g02470 | 168 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 42 | 62 | IPR013087 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Phac1g02470 | Phac-Chr1 | 34369576 | 34370165 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Phac1g02470 | 1 | 159 | C2H2 Transcription Factor Family | AT2G37430 | 50.000 | 7.47e-43 | 139 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | C2H2 | Phac1g02470 | zf-C2H2_6 | 7.6e-10 | CL0361 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Phac1g02470 | - | - | gmx:100806997 | 248.825 |