Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g02444 ATGGCTTCGCGGCGGCTCCGGGACCTCCAATCCCAAGCGGCGAACAAGATCTGCGTCGACTGTTCCCAGAAGAATCCGCAATGGGCGTCAGTGTCGTACGGAGTCTTTATGTGCTTAGAGTGCTCCGGCAAGCACCGCGGCCTCGGCGTCCACATCTCCTTCGTTCGATCCGTCACCATGGATTCCTGGTCCGAAATCCAGATCAAGAAGATGGAAGCTGGAGGCAACGATAAACTCAACTCCTTTCTCAAGCAATACGGCATCGCCAAGGAAACCGACATCGTTGCCAAGTACAATTCCAACGCCGCCTCCGTCTACCGCGACCGCATCCAGGCCATCGCCGACGGCCGCCCCTGGCGGGATCCCCCCGTCGTCAAGGAGACCATTCGCTCCTCAGTCTCCAAGGGAAAGCCGCCCCTATCCACCAGCAACAACGGCGGATGGGATAATTGGGACGCGGACGATGGGATCGGATCGGCGCGGGCGGGCTCCGATCTGCGGCGGAACCAATCCACCGGCGATGTAAGGGGGTTCGGCGGCGGCGGGAGCGTGGCTAGGTCGAAGTCGACGGAGGATATGTACACTCGCGCACAGCTGGAAGCCTCTGCTGCCAATAAGGAGGATTTCTTCGCGAGGAGGAGGGCGGAGAATGAGGCGCGACCGGAGGGGCTTCCGCCTTCGCAGGGTGGCAAATACGTTGGTTTCGGATCCGGCCCCGCCCCGAGCCAAAGGGTTAATCAGCAAAACGATTATCTATCTGTCGTTTCTCAGGGATTCGGTAAATTGTCGTTGGCTGCTGCTTCGGCTGCTCAGTCTGCTGCCAATGTTGTTCAGGCCGGGACAAAAGAGATCTCTGCTAAGGTAAAAGAGGGTGGTTATGATTACAAGGTCAATGAAACTGTCAATGTTGTCTCTCAGAAGACATCAGAGATTGGACATAGGACATGGGGTATAATGAGAGGGGTCATGGCAATGGCTACACAGAAGGTTGAGGAATACACTAGAGATAATCCAAATGGGACATCTGATAACTGGAAACGAAATGAAACTGATAAAAACGGTTTCTATCAGGAGTTTAATCAAGAGAACAAAGGCTGGAATTCTTCTGGCAGAGAAGGACTACACTCTACGGGTAGACAAACTAATTCAAGCTCTTGGGACGATTGGGACCACGAAGATTCTAGGAAGAAAGAAGCTGCAAAAGGATCGTCTCATCAGTCATCAGGCGGGCGATCTGATACTTACAACTCTAGCTCTTGGGATGACTGGGACCATGAAGATACAAGGAAGAAAGAAGCAGCTAAAGGGTCTGCTTCCCATAGCAGTGATGGTTGGGCTGGTTGGGATAATGCCAAAGATGAAGGATTTGATGATTTCTATGGGAATACATCTAATAATAAAGCTGCTGGTCATAATGAGAAGGCGGGTGTTGCCTGGACAGGAGGAGGTTTTCTCTAA 1458 0.5274 MASRRLRDLQSQAANKICVDCSQKNPQWASVSYGVFMCLECSGKHRGLGVHISFVRSVTMDSWSEIQIKKMEAGGNDKLNSFLKQYGIAKETDIVAKYNSNAASVYRDRIQAIADGRPWRDPPVVKETIRSSVSKGKPPLSTSNNGGWDNWDADDGIGSARAGSDLRRNQSTGDVRGFGGGGSVARSKSTEDMYTRAQLEASAANKEDFFARRRAENEARPEGLPPSQGGKYVGFGSGPAPSQRVNQQNDYLSVVSQGFGKLSLAAASAAQSAANVVQAGTKEISAKVKEGGYDYKVNETVNVVSQKTSEIGHRTWGIMRGVMAMATQKVEEYTRDNPNGTSDNWKRNETDKNGFYQEFNQENKGWNSSGREGLHSTGRQTNSSSWDDWDHEDSRKKEAAKGSSHQSSGGRSDTYNSSSWDDWDHEDTRKKEAAKGSASHSSDGWAGWDNAKDEGFDDFYGNTSNNKAAGHNEKAGVAWTGGGFL* 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g02444 485 MobiDBLite consensus disorder prediction 403 417 - -
Phac1g02444 485 MobiDBLite consensus disorder prediction 385 402 - -
Phac1g02444 485 Pfam Putative GTPase activating protein for Arf 4 103 IPR001164 GO:0005096
Phac1g02444 485 Gene3D Arf GTPase activating protein 1 124 IPR038508 -
Phac1g02444 485 MobiDBLite consensus disorder prediction 215 245 - -
Phac1g02444 485 FunFam ADP-ribosylation factor GTPase-activating protein 1 128 - -
Phac1g02444 485 CDD ArfGap_ArfGap1 2 116 - -
Phac1g02444 485 SMART arf_gap_3 3 119 IPR001164 GO:0005096
Phac1g02444 485 SUPERFAMILY ArfGap/RecO-like zinc finger 3 109 IPR037278 -
Phac1g02444 485 PANTHER ADP-RIBOSYLATION FACTOR GTPASE-ACTIVATING PROTEIN AGD6-RELATED 2 408 IPR044519 GO:0005096|GO:0016192
Phac1g02444 485 PRINTS HIV Rev interacting protein signature 55 76 IPR001164 GO:0005096
Phac1g02444 485 PRINTS HIV Rev interacting protein signature 15 34 IPR001164 GO:0005096
Phac1g02444 485 PRINTS HIV Rev interacting protein signature 34 51 IPR001164 GO:0005096
Phac1g02444 485 MobiDBLite consensus disorder prediction 134 149 - -
Phac1g02444 485 MobiDBLite consensus disorder prediction 129 190 - -
Phac1g02444 485 ProSiteProfiles ARF GTPase-activating proteins domain profile. 3 109 IPR001164 GO:0005096
Phac1g02444 485 MobiDBLite consensus disorder prediction 361 485 - -
Phac1g02444 485 MobiDBLite consensus disorder prediction 418 437 - -
Phac1g02444 485 MobiDBLite consensus disorder prediction 361 384 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g02444 Phac-Chr1 34208231 34213848 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac1g02444 4 86 C2H2 Transcription Factor Family AT4G21160 50.000 2.00e-22 96.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g02444 K12492 - gmx:100801306 803.127