Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g02427 ATGGCACCTAGAAACTTTTGCACCCAAATAACAGCACTTGTTGTAGATGACAATGTACTGAATAGAAAGATTCATCAAAAGCTGTTGGAGAGTGCTGGAGTGAGAAATCAAGAGGGAGTGGCCAATGGGAAAGAAGCAGTGGACATTCATTGCCATGGACGAAGATTTGACCTTATTCTCATGGACATGGACATGCCTATCATGAATGGCATTGAGGCAACAAAGGAACTTCGTTCAATGGGCATTCGGAGCATGATTGTTGGTGTGTCATCACGTTGTACGGAAACAGAAATACGAAAATTTATGGAATCAGGGTTGAATGATTACCACGAGAAACCCTTGAACAGTGCTAAGCTTAATTCAATTCTTGATAAGATGAACCCTAGTTTTACTAGTTAA 399 0.406 MAPRNFCTQITALVVDDNVLNRKIHQKLLESAGVRNQEGVANGKEAVDIHCHGRRFDLILMDMDMPIMNGIEATKELRSMGIRSMIVGVSSRCTETEIRKFMESGLNDYHEKPLNSAKLNSILDKMNPSFTS* 133
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g02427 132 PANTHER TWO-COMPONENT RESPONSE REGULATOR 11 127 - -
Phac1g02427 132 CDD REC_hyHK_CKI1_RcsC-like 13 123 - -
Phac1g02427 132 ProSiteProfiles Response regulatory domain profile. 11 127 IPR001789 GO:0000160
Phac1g02427 132 SMART REC_2 10 123 IPR001789 GO:0000160
Phac1g02427 132 SUPERFAMILY CheY-like 9 126 IPR011006 -
Phac1g02427 132 Pfam Response regulator receiver domain 13 123 IPR001789 GO:0000160
Phac1g02427 132 Gene3D - 2 129 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g02427 Phac-Chr1 34005838 34006610 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac1g02427 10 119 Response Regulator Gene Family AT3G04280 49.107 1.68e-27 97.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Phac1g02427 Response_reg 3e-22 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g02427 - - gmx:100794931 211.846