Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g02405 ATGGCAACTCAAGGTCAAGTCATCACCTGCAAAGCTGCGGTGGCCTGGGAACCCAACAAGCCCTTGACTATTGAAGACGTTCAGGTGGCTCCGCCTCAGGCCGGCGAGGTTCGAGTTCAAATCCTCTACACCGCTCTCTGTCACACCGATGCTTACACTTGGGGCGGCAAGGATCCCGAAGGCCTCTTCCCCTGTATTCTCGGCCATGAAGCTGCTGGGATCGTGGAGAGTGTTGGAGAAGGTGTTACTGATGTTAAGCCTGGGGATCATGTCATTCCCTGTTACCAGGCTGAGTGTGGGGAGTGCAAGACTTGCAAATCAGGGAAGACCAACCTTTGCGCCAAGGTTCGCTCTGCCACTGGAGTTGGGGTCATGCTCAATGATGGCAAGAGTCGGTTCTCGATTAATGGAAAGCCCATTTATCATTTCATGGGAACCTCCACTTTTAGTCAATACACTGTTGTCCATGATGTTAGTGTAGCTAAGATTGACCCCATAGCTCCTCTGGACAAAGTTTGTCTTCTCGGATGTGGTGTTTCAACTGGCCTTGGAGCTGTGTGGAACACTGCAAAGGTTGAGCCCGGGACAATTGTTGCTATTTTTGGCCTTGGGACTGTTGGGCTTGCTGTTGCAGAGGGTGCAAAAACTGCTGGTGCATCCCGGATTATTGGCATAGATATTGACAGCAAGAAGTTTGATACTGCGAAGAACTTTGGAGTCACCGAGTTTATAAATCCAAATGAGCATGATAAACCAATTCAGCAGGTCATAATTGATCGTACAGATGGTGGAGTTGATTATAGCTTTGAGTGTATTGGAAATGTTTCTGTGATGAGAGCTGCTTTGGAATGCTGCCACAAGGGCTGGGGGACATCAGTTATCGTGGGTGTTGCAGCATCAGGTCAGGAAATATCAACCCGACCTTTCCAGTTGGTGAGTGGACGTGTCTGGAAAGGAACTGCTTTCGGTGGCTTCAAGAGCAGGTCACAGGTTCCTTGGCTCGTAGACAAGTACCTGAAGAAGGTAAAAATGTTTTTCAGAGTGTTTTGTTCATTACTTCAATATTTTTGTAAAGCATGGATAGTTACGAGGCTACATTGTGTCCTTGTCTGCTCTACTTGTTTTGCAGGAAATCAAGGTTGA 1143 0.4786 MATQGQVITCKAAVAWEPNKPLTIEDVQVAPPQAGEVRVQILYTALCHTDAYTWGGKDPEGLFPCILGHEAAGIVESVGEGVTDVKPGDHVIPCYQAECGECKTCKSGKTNLCAKVRSATGVGVMLNDGKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPIAPLDKVCLLGCGVSTGLGAVWNTAKVEPGTIVAIFGLGTVGLAVAEGAKTAGASRIIGIDIDSKKFDTAKNFGVTEFINPNEHDKPIQQVIIDRTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVSGRVWKGTAFGGFKSRSQVPWLVDKYLKKVKMFFRVFCSLLQYFCKAWIVTRLHCVLVCSTCFAGNQG* 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g02405 380 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 168 339 IPR036291 -
Phac1g02405 380 Pfam Alcohol dehydrogenase GroES-like domain 35 162 IPR013154 -
Phac1g02405 380 Pfam Zinc-binding dehydrogenase 206 330 IPR013149 -
Phac1g02405 380 SUPERFAMILY GroES-like 3 197 IPR011032 -
Phac1g02405 380 Gene3D - 182 320 - -
Phac1g02405 380 Gene3D - 13 341 - -
Phac1g02405 380 PANTHER ALCOHOL DEHYDROGENASE 5 341 - -
Phac1g02405 380 FunFam S-(hydroxymethyl)glutathione dehydrogenase 182 320 - -
Phac1g02405 380 NCBIfam S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase 10 340 IPR014183 GO:0006069|GO:0008270|GO:0051903
Phac1g02405 380 FunFam alcohol dehydrogenase 1-like isoform X1 18 181 - -
Phac1g02405 380 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 68 82 IPR002328 GO:0008270|GO:0016491
Phac1g02405 380 CDD alcohol_DH_class_III 8 341 IPR014183 GO:0006069|GO:0008270|GO:0051903
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g02405 Phac-Chr1 33730359 33733571 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac1g02405 10 331 Monolignol Biosynthesis Gene Families AT1G72680 26.748 2.68e-14 71.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g02405 K00121 - gmx:100499743 685.641