Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g02396 ATGGAAGATGAACGCAGAGACCAAGAGAAACACGTAACAAAATCTGACTACTCGAGGACCCAATTAAAAGTACTTATTGTGGATGACGTTAGGGTTATTCGAATGACTCATAAAATGCTGTTGGACAGAGTTGGGGTAAAAGATCACGTTGCTGTGGAAAATGGCAAAGAAGCAGTTGAACTTCATAACAATGGTCAAAGTTTTGATCTGATTCTCATGGATAAGGACATGCCTGTCATGAATGGAATTGAGGGAGAGAGTGGCATCTTCAAAAACAAAGGCAAGACATATATAATGAAACCTAAGAACTCAAGTTCCCAATTGAAAGCACTTGTTGTAGATGATGATAGAGTAAATCGAATGACTCATCAAGCGCTGTTGAAAAAAGTTGGGGTGGAAAATCTTGCTTCGGTGGAAAATGGCAAAAAAGCCGTGGACCTTCATTGCAATGGTGAAAGTTTTGACCTAATTCTCATGGATAAAGACATGCCTGTCATGAATGGAATTGAGGCAACAAAGCAACTTCGTTCAATGGGCATTCGTGACATGATTGTTGGTGTGTCATCATCACGTGGTGCGGAGAATGTAGAAGAATTCATGGAAGCAGGACTAGATGACTACTACACAAAGCCCTTGACGGTTGATACGCTCAAAGCAATTCTTGATAAGATCAAGTCATGA 681 0.4038 MEDERRDQEKHVTKSDYSRTQLKVLIVDDVRVIRMTHKMLLDRVGVKDHVAVENGKEAVELHNNGQSFDLILMDKDMPVMNGIEGESGIFKNKGKTYIMKPKNSSSQLKALVVDDDRVNRMTHQALLKKVGVENLASVENGKKAVDLHCNGESFDLILMDKDMPVMNGIEATKQLRSMGIRDMIVGVSSSRGAENVEEFMEAGLDDYYTKPLTVDTLKAILDKIKS* 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g02396 226 Gene3D - 91 226 - -
Phac1g02396 226 Gene3D - 2 90 - -
Phac1g02396 226 CDD REC 25 84 - -
Phac1g02396 226 CDD REC_hyHK_CKI1_RcsC-like 111 221 - -
Phac1g02396 226 ProSiteProfiles Response regulatory domain profile. 23 84 IPR001789 GO:0000160
Phac1g02396 226 PANTHER TWO-COMPONENT RESPONSE REGULATOR 19 84 - -
Phac1g02396 226 SMART REC_2 108 221 IPR001789 GO:0000160
Phac1g02396 226 SUPERFAMILY CheY-like 107 224 IPR011006 -
Phac1g02396 226 ProSiteProfiles Response regulatory domain profile. 109 225 IPR001789 GO:0000160
Phac1g02396 226 Pfam Response regulator receiver domain 24 96 IPR001789 GO:0000160
Phac1g02396 226 Pfam Response regulator receiver domain 111 221 IPR001789 GO:0000160
Phac1g02396 226 SUPERFAMILY CheY-like 21 84 IPR011006 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g02396 Phac-Chr1 33703048 33706874 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac1g02396 13 83 Response Regulator Gene Family AT3G04280 46.575 3.55e-10 54.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Phac1g02396 Response_reg 3e-22 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g02396 - - var:108322984 391.349