Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g02360 ATGGCGCCGAATCCAAGAGTGACAGCGGCATTTTCGGCAATGGCAAATATCGGGATTCATGAATCAAAAGTGAAACCAGTGTTGAAGAAGCTGCTTAAATTGTATGATAAAAACTGGGAACTCATTGAAGAAGAGAGTTACAGGGCTCTGGCTGATGCAATATTTGAGGAGGAAGAAAATAAGTTGCTGGAGCCAGACCAGAGTAACAAAAACAAGAAGGATAGAGAAGTAGACGATGAAGAAGCTCATATGCTTGAGGAGCCTTTACGACCTTTGAAGAGGTTGCGTTTGAGAGGCCAAGAGGGTCAATCTTCACGCCCTCTAACTAGTCCTGTCCACAATTCAGCCTCCTTTCCGTTGAAAATTCCAAAATTGGAAGATGGCACAGTGCCTGAAATTAGTCCCAGGCTGCAGCCTCAAAGCAGGGCTGTATTATCTGATGGAAATGCAAGGAATGATGCTCCTCATGTTCCCCCACAAGATGTTATTGTCAACAAGGGAAAGCAACCTGTATCACCTCAAGTTACACCCAGAGGGGGAAGATCTATGGCTGACCATACTTCCCTTGCAGAACCACCTAAAGAGTCAGCAGCTGAACCACGAGCTGCTGCTCCGTTGGTCAATAACAAAATGACTGTTCCATTTACTTTCATCAAGCCCAAGGATGAGCCTGTTGATGATTTGCCAGATTGTGTGATTCCCCTTGCTGTGATCCCTTCTGAACCATCAAGTGGAGGAAACTCTCTAATGGGTGCAACTGAAAAGAAAGATGGCCACGATACTATGGTATCACAGTGCAGAGATGAAGACGTTGAGCATGAATATATTATTTTGTCCTCAATTGAAGAACCAACTTCTGATGTAGATGTAGCATTGCCATCTATAGGAGAGGAACAATGCGTAAAGATAACACATACTGACGATGTTTCAAAGGAATCTGAGACCGATGTTTCACCCATTGTGAGAGCAAATAAAGATCCAGTCATTGCAAATGGGTCAATCATTGTTAGGTCTTCTACTTCCTTGGCTGAACCTGAAGGTCCTAGTTCTCTACCCTACCCAAGTGATCAGGATGATGCTGTACTAGCTTCCAAGAAGTTTGGGACGAATGCTTTCTTACAAAGTAATGGTGGGAAGGAGCTAGAGGATCCTGTATCCACATATTCAGGTACCTTAGTGGTTGTTCCAAAATGTCAACTTACAACTGAAAATGATGCAAGGGCTGTTCACAATGTTAATGACCTAGCAAAGGGAGAAGAAAGAGTGAATATTTCATGGGTGAATAACACTACTGATGATCTTCCTCCACCCTTTCACTACATACCCCAAAACCTTGTGTACCGAGATGCTTGTGTTAATTTTTCTCTATCTCGTATTGGGAATGGGGATTGTTGTTCAACTTGTAAGGGCAATTGTGTATTGTCATCTAAACCATGTCCTTGTACAAATAAAACTGGGGGTGAATTTGCTTTTACTGCACAAGGCCTGCTAAAGGAAGCGTTCTTGGATGAATGTATCGCCATCAACCGCGATTCCCAAAATTATTTCTATTGCAAAGCCTGTCCGTTCGAACGATCAAAGAATGATGATTGTTTAGAACCATGTAAAGGACACCTAAAACAGAAGTTTATCAAAGAGTGCTGGAGCAAATGTGGCTGTGGAAAACAGTGTGGCAATCGGGTTGTCCAGCGTGGAATAAGTTGCAAGTTGCAGGTGTTTTTAACTTCAGACGGAAAAGGGTGGGGTCTTCGAACCTTAGAGGATCTTCCAAAAGGCACATTTGTATGCGAGTTCGTTGGGGAAATTTTAACTGTCAAAGAGTTGCACGAGAGGAACATGAAAAATCCAAAAAGTGGGAAATATACATTCCCAGTTTTATTGGATGCAGATTGGGATTTAGGAGTTGTGAAGGATAGGGAAGCTCTTTGCTTATATGCGGCATCATATGGAAATGCTGCTAGGTTTATTAATCACAGATGCTTGGATGCAAACTTGATTGAGATCCCAGTTGAAGTTGAGTGCCCAACTCATCAGTACTATCATTTTGCGTTCTTTGCATCCAGAAAAATAGCAGCCCAAGAAGAACTCACTTGGGATTACGGCATCAACTTTGATGATGACGATGAATCTGTTGAGCTTTTCCGGTGCAGATGTGGCAGTAAATTCTGCAGGAATATTAAGCGATCAAGATCCCTTAGATCTTCAGTTGCATGA 2214 0.4259 MAPNPRVTAAFSAMANIGIHESKVKPVLKKLLKLYDKNWELIEEESYRALADAIFEEEENKLLEPDQSNKNKKDREVDDEEAHMLEEPLRPLKRLRLRGQEGQSSRPLTSPVHNSASFPLKIPKLEDGTVPEISPRLQPQSRAVLSDGNARNDAPHVPPQDVIVNKGKQPVSPQVTPRGGRSMADHTSLAEPPKESAAEPRAAAPLVNNKMTVPFTFIKPKDEPVDDLPDCVIPLAVIPSEPSSGGNSLMGATEKKDGHDTMVSQCRDEDVEHEYIILSSIEEPTSDVDVALPSIGEEQCVKITHTDDVSKESETDVSPIVRANKDPVIANGSIIVRSSTSLAEPEGPSSLPYPSDQDDAVLASKKFGTNAFLQSNGGKELEDPVSTYSGTLVVVPKCQLTTENDARAVHNVNDLAKGEERVNISWVNNTTDDLPPPFHYIPQNLVYRDACVNFSLSRIGNGDCCSTCKGNCVLSSKPCPCTNKTGGEFAFTAQGLLKEAFLDECIAINRDSQNYFYCKACPFERSKNDDCLEPCKGHLKQKFIKECWSKCGCGKQCGNRVVQRGISCKLQVFLTSDGKGWGLRTLEDLPKGTFVCEFVGEILTVKELHERNMKNPKSGKYTFPVLLDADWDLGVVKDREALCLYAASYGNAARFINHRCLDANLIEIPVEVECPTHQYYHFAFFASRKIAAQEELTWDYGINFDDDDESVELFRCRCGSKFCRNIKRSRSLRSSVA* 738
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g02360 737 Pfam Ubiquitin-binding WIYLD domain 6 60 IPR018848 -
Phac1g02360 737 ProSiteProfiles Pre-SET domain profile. 464 565 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Phac1g02360 737 Pfam SET domain 580 701 IPR001214 GO:0005515
Phac1g02360 737 CDD SET_SETDB-like 436 701 - -
Phac1g02360 737 MobiDBLite consensus disorder prediction 102 116 - -
Phac1g02360 737 Gene3D SET domain 415 726 IPR046341 -
Phac1g02360 737 Gene3D - 1 60 IPR043017 -
Phac1g02360 737 SMART preset_2 412 552 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Phac1g02360 737 SMART set_7 568 707 IPR001214 GO:0005515
Phac1g02360 737 SUPERFAMILY SET domain 422 724 IPR046341 -
Phac1g02360 737 MobiDBLite consensus disorder prediction 59 201 - -
Phac1g02360 737 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 1 737 IPR025776 -
Phac1g02360 737 MobiDBLite consensus disorder prediction 59 100 - -
Phac1g02360 737 PANTHER INACTIVE HISTONE-LYSINE N-METHYLTRANSFERASE SUVR1-RELATED 1 733 - -
Phac1g02360 737 Pfam Pre-SET motif 416 560 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Phac1g02360 737 ProSiteProfiles SET domain profile. 568 701 IPR001214 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g02360 Phac-Chr1 33340641 33346524 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac1g02360 414 724 Su(var)3-9 homologs AT1G73100 29.394 6.63e-28 117
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Phac1g02360 Pre-SET 3.3e-16 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g02360 - - var:108323268 1212.21
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac1g02360 1 33340641 33346524 Phac1g02360 1 33340641 33346524 ECH
Phac7g02900 7 32780645 32790481 Phac1g02360 1 33340641 33346524 PCT