Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g02353 ATGGAAGCACGTCCTACTTTCTCTATTGAAAGATCAAATGCTAAGCAACACAATAACATGGGGATGTCTGAGGCATTTCCTTCATCGTTGCCTGTCCTTCCAATGCCTCGAGAAGGGACATGCCCCAAATTATCTGATTCTCAGCCAGCATTTATGGAAAAAGGGCTTAAACCAAAACCTTTTACTCATTCGAATCATTTAACTACCAGTGGAGCTGTCGGGCATATGTTTTCATCTTCTCCTGGATATTCAACTGACCTTCATCACTCATCCTTTTCATCTCATGAAAAGGACCCTAGAAATACTCCTTTTATTTCACAGTCATTGAGTAACATGGCTTCACTGCCCTTATCTTATTCTTCAAATAGTGAACCAATAGCTTCTACAACCTCAACACCTTATTCCAATGGAAACAGTGTTTCCTGGCATACAGATTCCCTGCCTAGCTTTCTTGATTTCCCTGCCAATACCTCAATTGATAATAGTCAAGTAGAAAGCAGTGCCTGCAATATTATGGCAACTGAAGAGTATTCTAAGCGAAATGATTGGCAGGAGTGGGCTGACCAGTTAATCAGTGATGATGATCCGTTGACTTCTAATTGGAATGAGCTTCTTGCTGACAACATTCAAGATCTCGAACCAAAGGCCTCAAATTCATCTTCACAACTTCCAATAGGACACCAATCTCAAAGCCATCAACAACTTAATGTTTCATCTGGAGAAAATCGTATCGGTGTTGCTCCATCTTCGTCAGCAAATTCGGTGCCTTCCAAGCCACGGATGCGCTGGACACCTGAGCTTCATGAGGCATTTGTGGAGGCTGTCAACCAACTTGGTGGGAGTGAAAGAGCTACCCCTAAAGGTGTGCTCAAGCTTATGAAAGTTGAAGGACTAACTATATACCATGTTAAAAGCCACTTACAGAAATACAGGACAGCTAGATATAGACCCGAGTCATCTGAAGGAGCTGCAGAGAAAAAACTAAGTCCAATTGAAGAGATATCATCTCTAGATTTGAAAACTGGTATTGAGATCACTGAAGCTCTGCGACTGCAGATGGAGGTTCAGAAGCGATTGCACGAACAGCTTGAGATTCAAAGAAATCTACAGTTGCGAATAGAGGAACAAGGAAGGTACCTCCAGATGATGTTTGAGAAACAGTGCAAATCTGGCATTGAAACATTTAAGGCATCATCGTCTGCTGTTGAGAGTCCACCTGGAGTTTCTTCGGATGCCATGAAAGATTCTGCGGCCAAAACTGAATCCGAAACTGTCAAAGTGGACCTTTGCGAGTCAGGACCTGATCAAGCCAATGGCAGTACCACAGTTGAGGAAAGCTCATCGAAAGTGGATGAGAAGCAGGATCCTCCTGAATGTAAAGCTTCTGAGAATCCTAAGCAACATGCTAGTGAAGATAGTTCTAAAGCCCCAAAGCGTCCAAGGACTGAGGATTAA 1455 0.4289 MEARPTFSIERSNAKQHNNMGMSEAFPSSLPVLPMPREGTCPKLSDSQPAFMEKGLKPKPFTHSNHLTTSGAVGHMFSSSPGYSTDLHHSSFSSHEKDPRNTPFISQSLSNMASLPLSYSSNSEPIASTTSTPYSNGNSVSWHTDSLPSFLDFPANTSIDNSQVESSACNIMATEEYSKRNDWQEWADQLISDDDPLTSNWNELLADNIQDLEPKASNSSSQLPIGHQSQSHQQLNVSSGENRIGVAPSSSANSVPSKPRMRWTPELHEAFVEAVNQLGGSERATPKGVLKLMKVEGLTIYHVKSHLQKYRTARYRPESSEGAAEKKLSPIEEISSLDLKTGIEITEALRLQMEVQKRLHEQLEIQRNLQLRIEEQGRYLQMMFEKQCKSGIETFKASSSAVESPPGVSSDAMKDSAAKTESETVKVDLCESGPDQANGSTTVEESSSKVDEKQDPPECKASENPKQHASEDSSKAPKRPRTED* 485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g02353 484 Pfam Myb-like DNA-binding domain 260 311 IPR001005 -
Phac1g02353 484 MobiDBLite consensus disorder prediction 9 25 - -
Phac1g02353 484 MobiDBLite consensus disorder prediction 214 260 - -
Phac1g02353 484 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 224 468 IPR044848 GO:0003700
Phac1g02353 484 NCBIfam myb-like DNA-binding domain, SHAQKYF class 258 312 IPR006447 GO:0003677
Phac1g02353 484 MobiDBLite consensus disorder prediction 446 484 - -
Phac1g02353 484 FunFam Myb family transcription factor 257 315 - -
Phac1g02353 484 SUPERFAMILY Homeodomain-like 256 312 IPR009057 -
Phac1g02353 484 Coils Coil 346 366 - -
Phac1g02353 484 MobiDBLite consensus disorder prediction 1 41 - -
Phac1g02353 484 MobiDBLite consensus disorder prediction 214 258 - -
Phac1g02353 484 Pfam MYB-CC type transfactor, LHEQLE motif 343 390 IPR025756 -
Phac1g02353 484 MobiDBLite consensus disorder prediction 398 484 - -
Phac1g02353 484 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 256 315 IPR017930 -
Phac1g02353 484 Gene3D - 257 316 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g02353 Phac-Chr1 33319921 33327585 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac1g02353 1 456 G2-like Transcription Factor Family AT4G28610 47.425 8.61e-108 324
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Phac1g02353 Myb_DNA-binding 9.1e-09 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g02353 - - gmx:100810560 839.336