Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g02351 ATGTCAACTTTCCAAAAGGTTCATGCTCTAGTCTTTCATATACTCATGCTTTTTATGCTTCCATTGAGAATCGCTTCATCACCAAGAGCAGAAGCAGAGGCCCTTGTCAAATGGAAAAACAGTCTATCCCCACCTCTTCCTCCTTCTCTAAACTCATGGTCCCTCACCAACCTTCCCAACCTTTGCATTTGGGATGCCATTGTTTGTGACAACACCAACACAACAGTCTCAGAGATAAACTTGTCTGGTGCCAATCTCACTGGGACTCTCTCTGCCTTGGATTTTGCTTCCCTCCCTAACCTCACCCAACTCAACCTCAATGCCAACAATTTTGAGGGGTCAATACCATCCACAATTGGCAAACTCTCCAAGCTCACACTATTGGACTTGGGGAACAACTTATTTGATCACACTCTGCCTTATGAACTAGGTTGGCTAATGGAGCTTCAATATCTCAGTCTTTACAACAACAATCTTAATGGCATCATTCCTTATCAGCTCATGAATCTCCCTAAGGTATGGTACATGGACCTTGGTTCAAATTACTTTATAACTCCTCCTGACTGGTCCCCATATTCATGCTTGCCTTCCTTGACACGCCTTGCTTTACATCAAAGTCCATCATTGACTGGTGAATTCCCAAGTTTCATACTCAAGTGCCATAACTTGACATACCTAGACCTCTCTGAGAATAGTTGGAATGGCACTATACCAGAATCCTTGTATAGCAATTTGGGCAAGCTAGAATACCTCAACCTCACCAACTGTGGGTTTGAAGGAAAACTGTCACCCAGCTTGTCCATGCTTTCTAATCTCAAAGAACTTCGTATAGGTAATAACATGTTTAATGGTCCTGTTCCCACTGAGATAGGATTGATATCTGGGCTTCAAATTCTTGAACTGTATAACATTTCTGCCCATGGCAAAATTCCTTCTTCCATAGGCCAACTCAGGGAGCTAAGGCATCTTGATCTTAGTATAAATTATTTTAACTCTACAATCCCTTCTGAGCTTGGCCTATGCACAAATCTATCCTTCTTGAGTTTAGCAGTGAATGATTTGACTGGTCCTCTGCCCTTGTCATTAGCTAGTCTGTCTAGAATATCAGAATTGGGGATATCAGATAATTCCTTTTCTGGTGAACTTTCTCCTTCACTCATCTCTAACTGGACGCAGTTGATCTCCTTGCAACTCCAAAACAATAACTTTACAGGAAAGATTCCTACACATATTGGCCTGTTGAAGAAAATTAACTTCCTCTATCTGTACAATAATCAGTTCTCAGGTCCCATTCCTGTAGAGATTGGAAACCTGAAGGAAATGACAGAGTTAGACCTTTCACAAAACCAATTCTCTGGCCCACTTCCATCAACTCTTTGGAATCTGACAAACATTCAAGTCATGAATCTTTTCTTCAATCAGCTCTCTGGAACCATTCCCACTGATATTGGAAATTTGACCTCACTGCAAATCTTTGATGTCAACAACAATTACTTGTATGGGGAGTTGCCAGAAACCATTGCTCAACTAACTGCTTTAAGTAATTTTTCTGTGTTCAGCAATAACTTCACTGGCAGCATTCCTAGAGAATTTGGAAAGAGTAATCCTTCTTTGGCTCATGTCTACCTTTCAAACAACAGTTTCTCGGGAGAACTGCCTCCTGACATATGCAGTGGGGGCAATCTAACTATTTTGGCAGTCAATAACAACAGCTTTTCGGGGCCATTGCCAAAGTCATTGAGAAATTGTTCATCGCTTACTAGAGTTCGGCTTGATGATAATCAGCTCACTGGAAATATCACAGACGCATTTGGGGTTCTCCCAATTCTTATTTTTGTCTCACTTACTAGAAATCAACTCGTTGGTGAGCTCTCCCCGGAGTGGGGTGAGTGTGCCAACTTAACCAGTATGGATATGGGAAGCAACAAACTTTCTGGAAAAATACCTTCTGCGTTAAGTAAGTTGAGTCAATTAAGGTATTTAAGCCTTCATTCCAATGATTTCACTGGTAGTATCCCACCTGAAGTCGGAAATCTAAGCCTGCTTTTCACGTTCAATCTGAGCAGTAACCATTTATCGGGAGAAATCCCAAAGAGTTACGGGAGATTGGCTCAGCTAAATTTTCTTGATTTATCAAATAACAGCTTCAGTGGAAGCATTCCTAAAGAGCTTGGTGATTGTGATCGCTTACTGAGCCTGAACTTAAGTCATAACAGTCTATCTGGGGAGATACCAAATGAACTTGGCAATCTGTTCTCACTGCAAATCATGTTAGACATCAGCAGCAACTCTCTTTCTGGGCCTCTTCCCCAAAACCTTGGAAAGTTAACCACATTGGAGATTCTCAATGTGTCGCACAACCATCTATCAGGGACAATCCCACAATCTTTTTCAACCATGCTCAGCCTTCAATCTGTTGATTTTTCTTACAACAAATTGAGTGGTTCAATCCCCACTGGTCGTGTTTTCCAGACAGCCACTGCTGAAGCCTATGCTGGGAACTCAGGTTTGTGTGGTGACATAAAAGGATTAACTTGCCCCAAATCATTTTCCCCAGACAAATCCAGAGGAGTTAACAAAAAGGTTCTTCTTGGTGTTATCATACCAGTTTGTGCTTTACTTATTGGGATAATTAGTGTTGGAGTAATACTTGGTCGGCGGCATGAAAAAAAACACCTTGATGAAGAGTCCAAAAGCGTTGAAAAAAGTGATCAGCCTATTAGCGTGGTGTGGGGAAGAGATGGAAAATTCACATTTTCTGATCTTGTTAAGGCCACCGATGACTTCAATGACAAGTACTGCATTGGAAAAGGAGGATTTGGAAGTGTTTATAGAGCACAATTACTCACAGGTCAAGTTGTTGCTGTGAAGAGGCTCAACGTATCAGACTCTGATGACATTCCAGCAATGAAGCGCCAGAGCTTTTTGAATGAGATAAAATCACTTACAGGAGTGAGGCACCGCAATATAATAAAGCTTTATGGGTTCTGTTCTTGCAGAGGACAAATGTTTTTGGTTTATGAATATGTAGACAGAGGAAGTTTGGCAAAAGTGTTATATAGAGAGGAAGAAAATTTGGAGCTAATGTGGGGCACAAGGCTAAAAATTGTGCAAGGAATAGCACATGCAATTTCATACCTGCATAGTGATTGCTCCCCACCAATCGTGCACCGGGATGTAACACTGAATAACATATTACTAGACTCCGACTTAGAACCTCGTCTTGCAGATTTTGGCACAGCAAAACTGCTAAGCTCAGACACTTCAACTTGGACTTCAGTTGCTGGATCCTATGGTTACATGGCTCCAGAGCTAGCACAAACTATGAGAGTGACTGAGAAGTGCGACGTGTATAGTTTTGGGGTGGTGGTGATGGAGATAATGATGGGAAAGCATCCTGGAGAACTCTTGGGTACACTGTCTTCGAACAAGTATTTGTCATCAAAGGAGGAGGAACCACATGTGCTGTTGAAGGACGTGCTAGACCAAAGGCTTCCGCCTCCAACAGGCCAACTAGCAGAAGCAGTAGTGTTCACAATGACTATAGCTTTGGCATGCACACGTGCGGCTCCTGAGTCCAGACCCATCATGCGTGCTGTCGCACAAGAGCTATCGGCTACTACTCAGGCTTATCTTTCCCAGCCATTTGGCATCATAACCATGAACAAGCTTAGAGGGTTACCGAAATAG 3690 0.4225 MSTFQKVHALVFHILMLFMLPLRIASSPRAEAEALVKWKNSLSPPLPPSLNSWSLTNLPNLCIWDAIVCDNTNTTVSEINLSGANLTGTLSALDFASLPNLTQLNLNANNFEGSIPSTIGKLSKLTLLDLGNNLFDHTLPYELGWLMELQYLSLYNNNLNGIIPYQLMNLPKVWYMDLGSNYFITPPDWSPYSCLPSLTRLALHQSPSLTGEFPSFILKCHNLTYLDLSENSWNGTIPESLYSNLGKLEYLNLTNCGFEGKLSPSLSMLSNLKELRIGNNMFNGPVPTEIGLISGLQILELYNISAHGKIPSSIGQLRELRHLDLSINYFNSTIPSELGLCTNLSFLSLAVNDLTGPLPLSLASLSRISELGISDNSFSGELSPSLISNWTQLISLQLQNNNFTGKIPTHIGLLKKINFLYLYNNQFSGPIPVEIGNLKEMTELDLSQNQFSGPLPSTLWNLTNIQVMNLFFNQLSGTIPTDIGNLTSLQIFDVNNNYLYGELPETIAQLTALSNFSVFSNNFTGSIPREFGKSNPSLAHVYLSNNSFSGELPPDICSGGNLTILAVNNNSFSGPLPKSLRNCSSLTRVRLDDNQLTGNITDAFGVLPILIFVSLTRNQLVGELSPEWGECANLTSMDMGSNKLSGKIPSALSKLSQLRYLSLHSNDFTGSIPPEVGNLSLLFTFNLSSNHLSGEIPKSYGRLAQLNFLDLSNNSFSGSIPKELGDCDRLLSLNLSHNSLSGEIPNELGNLFSLQIMLDISSNSLSGPLPQNLGKLTTLEILNVSHNHLSGTIPQSFSTMLSLQSVDFSYNKLSGSIPTGRVFQTATAEAYAGNSGLCGDIKGLTCPKSFSPDKSRGVNKKVLLGVIIPVCALLIGIISVGVILGRRHEKKHLDEESKSVEKSDQPISVVWGRDGKFTFSDLVKATDDFNDKYCIGKGGFGSVYRAQLLTGQVVAVKRLNVSDSDDIPAMKRQSFLNEIKSLTGVRHRNIIKLYGFCSCRGQMFLVYEYVDRGSLAKVLYREEENLELMWGTRLKIVQGIAHAISYLHSDCSPPIVHRDVTLNNILLDSDLEPRLADFGTAKLLSSDTSTWTSVAGSYGYMAPELAQTMRVTEKCDVYSFGVVVMEIMMGKHPGELLGTLSSNKYLSSKEEEPHVLLKDVLDQRLPPPTGQLAEAVVFTMTIALACTRAAPESRPIMRAVAQELSATTQAYLSQPFGIITMNKLRGLPK* 1230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g02351 1229 Gene3D Transferase(Phosphotransferase) domain 1 1010 1215 - -
Phac1g02351 1229 FunFam Leucine Rich Repeat family protein, expressed 190 286 - -
Phac1g02351 1229 ProSiteProfiles Protein kinase domain profile. 929 1212 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac1g02351 1229 Pfam Protein kinase domain 931 1135 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac1g02351 1229 SUPERFAMILY L domain-like 44 404 - -
Phac1g02351 1229 SMART LRR_typ_2 655 679 IPR003591 -
Phac1g02351 1229 SMART LRR_typ_2 98 121 IPR003591 -
Phac1g02351 1229 SMART LRR_typ_2 438 462 IPR003591 -
Phac1g02351 1229 SMART LRR_typ_2 536 559 IPR003591 -
Phac1g02351 1229 SMART LRR_typ_2 486 510 IPR003591 -
Phac1g02351 1229 SMART LRR_typ_2 703 727 IPR003591 -
Phac1g02351 1229 SMART LRR_typ_2 122 146 IPR003591 -
Phac1g02351 1229 SMART LRR_typ_2 776 799 IPR003591 -
Phac1g02351 1229 SMART LRR_typ_2 317 341 IPR003591 -
Phac1g02351 1229 Gene3D Ribonuclease Inhibitor 28 190 IPR032675 -
Phac1g02351 1229 Pfam Leucine rich repeat N-terminal domain 30 70 IPR013210 -
Phac1g02351 1229 Gene3D Phosphorylase Kinase; domain 1 889 1009 - -
Phac1g02351 1229 Gene3D Ribonuclease Inhibitor 386 507 IPR032675 -
Phac1g02351 1229 FunFam MDIS1-interacting receptor like kinase 2 1010 1210 - -
Phac1g02351 1229 PANTHER LEUCINE RICH REPEAT KINASE 2 483 1208 - -
Phac1g02351 1229 SUPERFAMILY RNI-like 287 620 - -
Phac1g02351 1229 CDD STKc_IRAK 935 1204 - -
Phac1g02351 1229 ProSitePatterns Tyrosine protein kinases specific active-site signature. 1055 1067 IPR008266 GO:0004672|GO:0006468
Phac1g02351 1229 FunFam MDIS1-interacting receptor like kinase 2 28 189 - -
Phac1g02351 1229 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase At1g17230 535 850 - -
Phac1g02351 1229 Pfam Leucine Rich Repeat 779 798 IPR001611 GO:0005515
Phac1g02351 1229 Pfam Leucine Rich Repeat 247 267 IPR001611 GO:0005515
Phac1g02351 1229 SUPERFAMILY Protein kinase-like (PK-like) 909 1204 IPR011009 -
Phac1g02351 1229 Pfam Leucine rich repeat 614 668 IPR001611 GO:0005515
Phac1g02351 1229 SUPERFAMILY RNI-like 534 818 - -
Phac1g02351 1229 ProSitePatterns Protein kinases ATP-binding region signature. 935 957 IPR017441 GO:0005524
Phac1g02351 1229 FunFam MDIS1-interacting receptor like kinase 2 371 534 - -
Phac1g02351 1229 Gene3D Ribonuclease Inhibitor 195 385 IPR032675 -
Phac1g02351 1229 Gene3D Ribonuclease Inhibitor 515 848 IPR032675 -
Phac1g02351 1229 FunFam Leucine-rich repeat receptor protein kinase MSP1 892 1009 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g02351 Phac-Chr1 33314863 33319143 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac1g02351 1 673 Receptor kinase-like Gene Family AT4G08850 32.396 2.01e-79 281
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Phac1g02351 Pkinase 3.4e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g02351 - - pvu:PHAVU_001G163700g 2162.88