Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g02332 ATGGGGAGTAGGGTTAAGCAGGGAAGGAGATTGCAGAAGATGATGAAGTGTCTGTGTGTGAGGGAGCCGGTCAAAGGGGAAGATGAAACGGTCCCTTCCTCGGAATCTCTTGGAATCAGAGAATTTTATTCTTCAACAGCGAGTGGGCGTTCTGGCCTCGATGGAGAAATTGAGATGTTGAGGTCTGATTCTGGTAAAATAGACGAAACTGATTTGTCTTTGCGTGAGAGTGGCATCTTGGACAATGAGGAAGCTAGTGCTTTGTTAGGAAGAGATGAATATCATAAAGGGAATATAGAAGCTGCTTTACGTGTTTATGAGAAAATAAATATAGGCGCTGTAACTTCCAAGATGAAAATTTCCCTTGCCAAAAGCAGAGAACGTCCCAAAAAACATTCCTATTATTATTCTACTCCCCCAATGTCCATATACACGGCTGGATTACTGTTGGAAGCAATTTTCCTAAAAGCGAAATGCTTGCAGGTTCTAGGGAGGTTTAAAGAAGCTGCCCAAACTTGTAAAGTTATTCTGGACACAATTGAGTCTTCATTACCTGAAGGCTTGCCACAAAACTTCGGCAATGAGGGTAAATTGCAGGAGACTTTGAGTAAGGTAGTTGAGCTACTTCCAGATTTGTGGAAACTTACTGATTCTCCCCGTGATGTGATTTTGTCTTACCGTCGAGCACTCCTTCACCAATGGAATCTTGATGCAAAAACAATAGCAAGGATTCAGAAAGAATTTGTTGTTTTCCTTCTGTATAGTGGAGGGGAAGCAATCCCCTCGAATCTTCGTTCCCATATGGACAGCTCTTTTGTACCTAGAAATAACTTAGAAGAGGCTATACTCCTTTTAATGATTTTGCTAAGAAAAATTTCTCTAAATAAACTTGAGTGGGATCCATCAATTTTGGACCACCTTGCATTTGCTCTATCTGTTTCAGGGGATTTGACAGCTTTAGCCAATCAATGGGAAGAATTACTCCCTGGTACTGTCAATCGTAAAGAAAGGTACCATGCCTTATCTCTTTGTTATTATGGAGCAGGTAAGGACTTGGTAGCATTGAATCTTCTAAGGAGATTGTTGAGTAAAGAGGACCCAAAGCATGTTCCTTCTTTGTTAATTGCTTCTAAGATTTGTTGTGAGAACCCTGATCTTGCAAAAGATGGGGCAAGCTTAGCTCGCAAGGTGCTTGAGAACTTGGATGGAAGATGTGATCAGTTGGAAGGTCTTTCTAGTTGCTTACTTGGTGTTTCACTTTCAACACACTCCAAATTTGCTATTTCTAATTCTGAGAGGGTTGAGAAACAATCTGAGGCACTTCATTTTCTGGAAACTGCACACAAAGTGACCGGAATGAGTAACCCCCTTGTAATATACTGTTTGAGTTTAGAATATGCAGAGCAAAGGAAGTTGGATGCGGCACTTCATTATGCAAAATGCTTTCTAAACTTGGAAGCTGGGTCTAGTGTTAAAGGGTGGTTATTGTTAGCCCGTATATTATCAGCTAAAAAACAGTTTTTGGATGCCGAATCTATTATCAATGAGGCCTTAGATCAGACTGGAATATGGGATCAAGGAGAGTTACTGCGAACAAAAGCTAAACTACAAATTGTGCAGGGCCAGTTGAAGAGTGCCATTGAAACATGTACTCAGCTTCTTGCTATTCTCCTAGTTCAGAGAAAGACGTTCGGTTCAAGGAAGACGCTATATAAGGACTACATAGATCATGCTAGGAACATGGAAATAGAAATATGGCATGATCTTGCTTATCTGTACATAAGTCTGTCACGTTGGCAAGATGCAGAGGTGTGTCTTTCGAAATCTAAGGCCATCAAACTATACTCTGCTTCTAGATGTCATGCAATAGGTACTATGTACGAAGCAAAGGGCGTTCACAAAGAGGCTTTAAAAGCTTTTCGTGATGCTTTGAATATAGATCCCGGACATGTCCCGAGCTTGATCTCTACTGCGGTGGTTCTTAGACGGTGCAGTAATCGGTCAAATCCTGCAATCAGAAGCTTTCTGATGGATGCACTACGGCATGACAGATATAATGCTTCTGCATGGTATAATCTTGGCATTTTTCACAAGGACGAGGGTACAATGCTAGAAGCTGCAGAATGTTTTGAGACAGCCAACTTTCTTGAAGAATCGGCTCCAGTTGAACCTTTCAGATGA 2181 0.4127 MGSRVKQGRRLQKMMKCLCVREPVKGEDETVPSSESLGIREFYSSTASGRSGLDGEIEMLRSDSGKIDETDLSLRESGILDNEEASALLGRDEYHKGNIEAALRVYEKINIGAVTSKMKISLAKSRERPKKHSYYYSTPPMSIYTAGLLLEAIFLKAKCLQVLGRFKEAAQTCKVILDTIESSLPEGLPQNFGNEGKLQETLSKVVELLPDLWKLTDSPRDVILSYRRALLHQWNLDAKTIARIQKEFVVFLLYSGGEAIPSNLRSHMDSSFVPRNNLEEAILLLMILLRKISLNKLEWDPSILDHLAFALSVSGDLTALANQWEELLPGTVNRKERYHALSLCYYGAGKDLVALNLLRRLLSKEDPKHVPSLLIASKICCENPDLAKDGASLARKVLENLDGRCDQLEGLSSCLLGVSLSTHSKFAISNSERVEKQSEALHFLETAHKVTGMSNPLVIYCLSLEYAEQRKLDAALHYAKCFLNLEAGSSVKGWLLLARILSAKKQFLDAESIINEALDQTGIWDQGELLRTKAKLQIVQGQLKSAIETCTQLLAILLVQRKTFGSRKTLYKDYIDHARNMEIEIWHDLAYLYISLSRWQDAEVCLSKSKAIKLYSASRCHAIGTMYEAKGVHKEALKAFRDALNIDPGHVPSLISTAVVLRRCSNRSNPAIRSFLMDALRHDRYNASAWYNLGIFHKDEGTMLEAAECFETANFLEESAPVEPFR* 727
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g02332 726 Gene3D Tetratricopeptide repeat domain 430 559 IPR011990 GO:0005515
Phac1g02332 726 Gene3D Tetratricopeptide repeat domain 560 721 IPR011990 GO:0005515
Phac1g02332 726 Gene3D Tetratricopeptide repeat domain 63 391 IPR011990 GO:0005515
Phac1g02332 726 ProSiteProfiles TPR repeat profile. 687 720 IPR019734 GO:0005515
Phac1g02332 726 SUPERFAMILY TPR-like 436 556 IPR011990 GO:0005515
Phac1g02332 726 PANTHER PROTEIN NPG1 15 726 IPR043376 -
Phac1g02332 726 ProSiteProfiles TPR repeat profile. 617 650 IPR019734 GO:0005515
Phac1g02332 726 SUPERFAMILY TPR-like 528 713 IPR011990 GO:0005515
Phac1g02332 726 Pfam Tetratricopeptide repeat 618 649 IPR019734 GO:0005515
Phac1g02332 726 SMART tpr_5 583 616 IPR019734 GO:0005515
Phac1g02332 726 SMART tpr_5 617 650 IPR019734 GO:0005515
Phac1g02332 726 SMART tpr_5 491 524 IPR019734 GO:0005515
Phac1g02332 726 SMART tpr_5 687 720 IPR019734 GO:0005515
Phac1g02332 726 SMART tpr_5 527 560 IPR019734 GO:0005515
Phac1g02332 726 SMART tpr_5 150 183 IPR019734 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g02332 Phac-Chr1 33229520 33234177 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac1g02332 15 726 Calmodulin-binding Proteins AT4G28600 54.195 0.0 718
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g02332 K21843 - gmx:100784353 1239.94