Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g02317 ATGGATTCTGCAAGGAGTTGGTTACAGAAATTTCAACCACGAGATAAATTAAGAGCCTCTACTAGAAAGAAAGATGATACTCATGGTGGAAACGAAGCTCCAACCGTGCCTATGGACGATGCAACTCTTTCCAATATCACAAAGCAGAAGGTTGCTGCAGCTAAACAATACATTGAAAACCACTATAAGGAACAAATGAAGAACCTTCAGGAAAGGAAAGAACGTCGAACCATCTTGGAAAAGAAGTTGGCTGACGCCGATGTATCTGAGGAAGATCAAAATAACCTACTTAAATTTTTAGAGAAAAAGGAAACAGAATATATGCGTCTTCAAAGACATAAGATGGGTGTCGATGATTTTGAGTTATTGACCATGATTGGAAAAGGTGCATTTGGGGAGGTCAGAGTTTGTAAGGAAAAGGCTACAGATCATGTATATGCAATGAAAAAGCTAAAGAAATCAGAGATGCTTCGTAGAGGCCAGGTAGAACATGTTAGAGCTGAGAGGAATCTCCTTGCAGAGGTTGACAGCAATTGCATAGTTAAACTTTATTGTTCTTTCCAAGATGATGAGTATTTATATCTTATTATGGAATATCTACCTGGTGGGGATATGATGACTCTACTCATGAGAAAGGATACCTTGACTGAAGATGAAGCCAGATTTTATGTGGGAGAAACAGTTCTAGCTATTGAATCAATACATAAACGCAATTATATACATAGGGATATTAAGCCTGATAACTTATTACTTGATAAATATGGACACTTGAGACTGTCTGATTTTGGATTATGTAAACCATTAGACTGTAGTACACTTGAAGAAACAGATTTTTCCACTGGTCAAAATACAAATGGAGTCGTACAAAATGATGAATCTGGACGCACACAACAAGAACAATTGCAACATTGGCAAAAGAATAGGAGGACACTTGCTTATTCTACTGTTGGTACACCAGACTATATTGCTCCAGAAGTTTTATTAAAGAAAGGCTATGGAATGGAATGTGATTGGTGGTCACTTGGTGCTATTATGTATGAAATGTTGGTGGGATATCCGCCTTTTTATTCTGATGATCCAATGTCAACATGTAGGAAGATAGTAAATTGGAGATCTCATTTAAAGTTTCCTGAAGAAGCAAGGTTAACTATAGAGGCTAAAGATCTTATAAGTAAGCTTTTATGTAATGTGAGTCAGAGATTGGGCTCAAATGGTGCAGATGAAATAAAGGTTCATCCATTTTTCAATGGTGTAGAATGGGAAAGATTGTATCAAATGGAAGCTGCATTTATTCCTGAGGTCAACGATGAGTTAGACACTCAAAATTTTGAAAAGTTTGATGAGTCTGACCACCAGGCTCAATCATCAGCAAGAGCTGGCGGTCCATGGAGGAAGATGCTTTCATCTAAAGACTTGAATTTTGTGGGATACACATACAAAAACTTTGAAATTGTCAACGACTATCAAGTTCCTGGGATGACTGAATTAAGGAAGAAAAGTTCGAAAGTAAAGAAGCCATCCATCAAGTCCCTCTTTGATGGTGATTCTGAAACATCTGAAACATCTGAGGCTTCTGATTCAATTCCAAGCACAACTAAAAAGTTTGATGATCTATCTACTAATTCAGAATAG 1632 0.3719 MDSARSWLQKFQPRDKLRASTRKKDDTHGGNEAPTVPMDDATLSNITKQKVAAAKQYIENHYKEQMKNLQERKERRTILEKKLADADVSEEDQNNLLKFLEKKETEYMRLQRHKMGVDDFELLTMIGKGAFGEVRVCKEKATDHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDSNCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVGETVLAIESIHKRNYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLEETDFSTGQNTNGVVQNDESGRTQQEQLQHWQKNRRTLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPPFYSDDPMSTCRKIVNWRSHLKFPEEARLTIEAKDLISKLLCNVSQRLGSNGADEIKVHPFFNGVEWERLYQMEAAFIPEVNDELDTQNFEKFDESDHQAQSSARAGGPWRKMLSSKDLNFVGYTYKNFEIVNDYQVPGMTELRKKSSKVKKPSIKSLFDGDSETSETSEASDSIPSTTKKFDDLSTNSE* 544
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g02317 543 Pfam Protein kinase domain 121 415 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac1g02317 543 FunFam Non-specific serine/threonine protein kinase 204 271 - -
Phac1g02317 543 FunFam Non-specific serine/threonine protein kinase 91 203 - -
Phac1g02317 543 PANTHER SERINE/THREONINE-PROTEIN KINASE 38 470 - -
Phac1g02317 543 Gene3D Transferase(Phosphotransferase) domain 1 204 433 - -
Phac1g02317 543 SMART pkinase_C_6 416 481 IPR000961 GO:0004674|GO:0005524|GO:0006468
Phac1g02317 543 MobiDBLite consensus disorder prediction 512 543 - -
Phac1g02317 543 MobiDBLite consensus disorder prediction 9 30 - -
Phac1g02317 543 FunFam Non-specific serine/threonine protein kinase 314 433 - -
Phac1g02317 543 CDD MobB_NDR_LATS-like 54 115 - -
Phac1g02317 543 ProSitePatterns Protein kinases ATP-binding region signature. 126 149 IPR017441 GO:0005524
Phac1g02317 543 MobiDBLite consensus disorder prediction 1 39 - -
Phac1g02317 543 Pfam Protein kinase C terminal domain 434 479 IPR017892 GO:0004674|GO:0005524|GO:0006468
Phac1g02317 543 Gene3D Phosphorylase Kinase; domain 1 118 444 - -
Phac1g02317 543 MobiDBLite consensus disorder prediction 499 543 - -
Phac1g02317 543 ProSitePatterns Serine/Threonine protein kinases active-site signature. 239 251 IPR008271 GO:0004672|GO:0006468
Phac1g02317 543 SUPERFAMILY Protein kinase-like (PK-like) 93 457 IPR011009 -
Phac1g02317 543 ProSiteProfiles AGC-kinase C-terminal domain profile. 416 489 IPR000961 GO:0004674|GO:0005524|GO:0006468
Phac1g02317 543 SMART serkin_6 120 415 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac1g02317 543 ProSiteProfiles Protein kinase domain profile. 120 415 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac1g02317 543 CDD STKc_NDR_like 118 480 - -
Phac1g02317 543 Coils Coil 62 82 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g02317 Phac-Chr1 32989641 32994365 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac1g02317 1 509 AGC Kinase Gene Family AT1G03920 77.127 0.0 834
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_NDR Phac1g02317 Pkinase 9.6e-63 CL0016