Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g02313 ATGGGTCTCAGAGACATTGGTGCTTCACTGCCTCCTGGGTTTCGCTTTTATCCCAGTGACGAGGAATTGGTCTGCCATTACCTCTACAAAAAGATCGCAAATGAGGATGTTCTCAAGGGTACCTTGGTGGAAATCGACCTCCACATATGTGAACCATGGCAACTTCCAGAGGTGGCTAAGCTGAATGCGAACGAGTGGTACTTCTTCAGCTTCCGGGACCGCAAATACGCGACGGGGTTTCGAACAAACCGAGCAACCACATCAGGGTATTGGAAAGCAACAGGAAAGGATCGGACGGTGGTGGATCCAACCACGCAAGAGGTTGTAGGGATGAGGAAAACGCTGGTGTTCTACAGGAACAGAGCTCCAAATGGCATCAAAACCGGGTGGATCATGCATGAGTTCCGCTTGGAGACCCCACACATGCCTCCAAAGGAGGACTGGGTGCTGTGCAGAGTCTTCCACAAAAGCAAAGAAGAAAACAATGGTTCCAAACTCATGTACGAATATGATACAACACCTCAATCCCTAACCTTGGCTTCGTCATCACCAACCAACCAAACCATGCCTGGTGGGTACAACAGATTTCCTACCTCTTTCAGTTCCTCCATGCCATTGCCAACCCACCACCACCACCATCATCATTTCAACACAAACCAAAACTCTTCTTTCATGGATCTCCTTCACTTCTCTCGGGACACCAACACCAACAACACCATCGTTACTCAAATTAGTTCCAAAGGAGATGATGGATATGGTTTCTTGTGGGACATGGATCTAGAAGAAAATAGCCTAGAAGATGCCGTGGCTTCAAACTTGGACGCAATAACGTTTGAGATTGACAATAATCACAATGATAATAATATGGTATTCCTATAA 879 0.4676 MGLRDIGASLPPGFRFYPSDEELVCHYLYKKIANEDVLKGTLVEIDLHICEPWQLPEVAKLNANEWYFFSFRDRKYATGFRTNRATTSGYWKATGKDRTVVDPTTQEVVGMRKTLVFYRNRAPNGIKTGWIMHEFRLETPHMPPKEDWVLCRVFHKSKEENNGSKLMYEYDTTPQSLTLASSSPTNQTMPGGYNRFPTSFSSSMPLPTHHHHHHHFNTNQNSSFMDLLHFSRDTNTNNTIVTQISSKGDDGYGFLWDMDLEENSLEDAVASNLDAITFEIDNNHNDNNMVFL* 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g02313 292 Gene3D NAC domain 19 162 IPR036093 GO:0003677|GO:0006355
Phac1g02313 292 Pfam No apical meristem (NAM) protein 11 137 IPR003441 GO:0003677|GO:0006355
Phac1g02313 292 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 9 219 - -
Phac1g02313 292 ProSiteProfiles NAC domain profile. 10 156 IPR003441 GO:0003677|GO:0006355
Phac1g02313 292 SUPERFAMILY NAC domain 8 156 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g02313 Phac-Chr1 32911903 32918734 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac1g02313 6 159 NAC Transcription Factor Family AT1G56010 58.025 1.68e-64 204
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Phac1g02313 NAM 1.8e-37 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g02313 - - gmx:100806284 495.738