LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Phac1g02298	ATGATGAAGTTTTTAGGATTGTCGCATCTTCTTCAAATTCTTTCATGCATTCTGCTATTGACTCCCTCATTTTCTAAAGATGATCGAAAGATTTACATAGTCTACATGGGAGCATATCCAAAGGACATGGAAATCACAGAATCATTTCACACCAGTATGGTTCAAAGTGTCATCGGAAGCAAATTTGCACCAGATACTTTGCTGCACCGCTACACGAGTTTCAATGGATTTGTGGCGAAACTAACCAAAGAAGAATCAGAAAGAATGAAAGCAATGGATAGTGTGGTGTCTGTTATTCCAAATAGAGTCTACAATGTCCAAACAACAAGGTCCTGGGACTTCCTTAAGTTCCCTGAAAATGTCCCAAGATCAAGTGTAGAAGGTAACACAATCGTTGGAGTAATCGATAGTGGACTTTGGACTGGTTCCAATAGCTTTACTGATGGAGGCTTTGGTCCACCACCACAGAAATGGAAGGGAACATGCTATAACTTCACTTGCAATAACAAAATAATTGGAGCAAAATATTTTCGCATTGGGGGTGGGTTCGAGCCGCAGGACATGATATCTCCAACTGATACCACAGGTCACGGGTCTCACTGTGCATCCATTGCTGCTGGAAATATTGTTCCCAACGCAGATCTGTTTGGGCTTGGCTCAGGAAGAGCAAGAGGAGGAGTTCCATCAGCACGGATTGCTGTGTATAAAGTTTGTTGGACAAAGAGTTGTGAGGCTGTTGACATTCTTGCAGGATTTGATGCAGCCATTGCTGATGGTGTTGATATTCTTTCTGTTTCACTTGGATCAAGAAAAGTCATACACTTCAAATATTTTGAAGATGTATTTGCAATAGGAGCTTTCCATGCAATGAGGAGTGGCATATTAACTTCTAAAACTGCAGACAATTTGGGTCCAAATTCTTACACAATGACCAATCTTGCACCCTGGTTCATTTCTGTGGCTGCCACCACTATAGACAGAAAGTTTTTCACCAATCTCCAACTGGGCAATGGCCAGATCATCCAGGGAATTTCAGTGAATACATTTAGCCCAACACAGAATGGTTACCCTTTAATATATGGTGGAGATGTACCAGCTCCTGGATTTAATAGTTCCACTTCCAGTATGTGCATTGATAATTCTTTGAATCGAGCTTTGGTGAGCGGGAAAATTGTGTTGTGTGATGACTATCATTCTTCTGGACGTGTGGGATTTGCTTCTGGAGCTGCTGGTGTTATCTTCAGAAGTACATTGCCTTTAGTTGTTCCAGCTATATTTGCATTGTCAACAATTCACATTAGCCAAAGTGATGGGAATTCCGTATATAATTATTTAAAGTCAACAAGTAATCCAGCAGCTATCATATTCAAGAGTTACGAAGGAATAGATTCATCAGCCCCTTTCATTGCTCCTTTCTCATCAAGAGGTCCAAATAGGATCACTCCAGACATTCTTAAGCCTGATATAGCAGCTCCAGGAGTTACCATTCTGGCTTCATGGTCTCCACTTTCTCCTATTTCTGGAGTTAAAGGAGATCTTAGAATATCGACTTCCAATATAGTATCTGGAACTTCAATGGCATGCTCTCATGTTACTGCAGCAGCTGTTTACGTCAAATCATTTCATCCCAATTGGTCTCCTGCTGTACTTAAATCCGCATTGATGACAACTGCTACCCCTCTGAATCCTGCACTTAATATGGATGCTGAATTTGCTTACGGTGCGGGGCAAATCAATCCTTTGAAGGCAGTAAATCCTGGACTAGTTTATGATGCTGGTCCGAATGATTATATTAATTTTCTGTGTGGACAACCAGGTTATACTACAAATGAGTTGCAAATCATTACAGGAGATAACAGCACTTGTACATCAACAAATAGAGGATCTGTTTTCAACCTTAATCTCCCATCTTTTGCTCTATCAACCGCTTTCTCAAGGTACAACGATGTCACTTTTGGTCGAACTGTCACTAATGTTGGATCAGCTAGATCCACATATAGGGCAATAGTATCTGGATATCCATCTTCTTTAAACATCCAAGTAGTGCCAAATGTTTTGACCTTCACATCTGTGGGTCAGAGCCTGTCCTTCATCCTTAGGATTCAAGGAACCATTAATGCAAACTTGGTTTCTTCTTCTTTAACTTGGGATGATGGCACTTATCAGGCAAGGAGCCCCATTGTTATTTATGTTCCATAA	2199	0.4079	MMKFLGLSHLLQILSCILLLTPSFSKDDRKIYIVYMGAYPKDMEITESFHTSMVQSVIGSKFAPDTLLHRYTSFNGFVAKLTKEESERMKAMDSVVSVIPNRVYNVQTTRSWDFLKFPENVPRSSVEGNTIVGVIDSGLWTGSNSFTDGGFGPPPQKWKGTCYNFTCNNKIIGAKYFRIGGGFEPQDMISPTDTTGHGSHCASIAAGNIVPNADLFGLGSGRARGGVPSARIAVYKVCWTKSCEAVDILAGFDAAIADGVDILSVSLGSRKVIHFKYFEDVFAIGAFHAMRSGILTSKTADNLGPNSYTMTNLAPWFISVAATTIDRKFFTNLQLGNGQIIQGISVNTFSPTQNGYPLIYGGDVPAPGFNSSTSSMCIDNSLNRALVSGKIVLCDDYHSSGRVGFASGAAGVIFRSTLPLVVPAIFALSTIHISQSDGNSVYNYLKSTSNPAAIIFKSYEGIDSSAPFIAPFSSRGPNRITPDILKPDIAAPGVTILASWSPLSPISGVKGDLRISTSNIVSGTSMACSHVTAAAVYVKSFHPNWSPAVLKSALMTTATPLNPALNMDAEFAYGAGQINPLKAVNPGLVYDAGPNDYINFLCGQPGYTTNELQIITGDNSTCTSTNRGSVFNLNLPSFALSTAFSRYNDVTFGRTVTNVGSARSTYRAIVSGYPSSLNIQVVPNVLTFTSVGQSLSFILRIQGTINANLVSSSLTWDDGTYQARSPIVIYVP*	733

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Phac1g02298	732	Gene3D	Peptidase S8/S53 domain	130	597	IPR036852	GO:0004252\|GO:0006508
	Phac1g02298	732	Gene3D	Peptidase S8 propeptide/proteinase inhibitor I9	21	106	IPR037045	-
	Phac1g02298	732	PRINTS	Subtilisin serine protease family (S8) signature	193	206	IPR015500	-
	Phac1g02298	732	PRINTS	Subtilisin serine protease family (S8) signature	127	146	IPR015500	-
	Phac1g02298	732	PRINTS	Subtilisin serine protease family (S8) signature	522	538	IPR015500	-
	Phac1g02298	732	ProSitePatterns	Serine proteases, subtilase family, histidine active site.	197	207	IPR022398	-
	Phac1g02298	732	Gene3D	-	326	462	-	-
	Phac1g02298	732	CDD	PA_subtilisin_like	332	455	-	-
	Phac1g02298	732	PANTHER	PROPROTEIN CONVERTASE SUBTILISIN/KEXIN	32	728	IPR045051	-
	Phac1g02298	732	Pfam	Subtilase family	130	576	IPR000209	GO:0006508\|GO:0008236
	Phac1g02298	732	Gene3D	-	601	731	-	-
	Phac1g02298	732	CDD	Peptidases_S8_3	104	559	IPR034197	-
	Phac1g02298	732	Pfam	Peptidase inhibitor I9	32	105	IPR010259	-
	Phac1g02298	732	ProSiteProfiles	Serine proteases, subtilase domain profile.	111	584	-	-
	Phac1g02298	732	Pfam	Fibronectin type-III domain	632	729	IPR041469	-
	Phac1g02298	732	SUPERFAMILY	Subtilisin-like	107	588	IPR036852	GO:0004252\|GO:0006508

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Phac1g02298	Phac-Chr1	32760583	32765629	Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Phac1g02298	13	730	Subtilisin-like Serine Gene Family	AT3G46850	46.765	0.0	601

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Phac1g02298	-		-	vum:124828449	1072.77